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Systematic analysis reveals the prevalence and principles of bypassable gene essentiality

机译:系统分析揭示了可绕过基因本质的普遍性和原理

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Gene essentiality is a variable phenotypic trait, but to what extent and how essential genes can become dispensable for viability remain unclear. Here, we investigate 'bypass of essentiality (BOE)' - an underexplored type of digenic genetic interaction that renders essential genes dispensable. Through analyzing essential genes on one of the six chromosome arms of the fission yeast Schizosaccharomyces pombe, we find that, remarkably, as many as 27% of them can be converted to non-essential genes by BOE interactions. Using this dataset we identify three principles of essentiality bypass: bypassable essential genes tend to have lower importance, tend to exhibit differential essentiality between species, and tend to act with other bypassable genes. In addition, we delineate mechanisms underlying bypassable essentiality, including the previously unappreciated mechanism of dormant redundancy between paralogs. The new insights gained on bypassable essentiality deepen our understanding of genotype-phenotype relationships and will facilitate drug development related to essential genes.
机译:基因必需性是可变的表型性状,但是尚不清楚在何种程度上以及如何使必需基因对于生存力而言是可分配的。在这里,我们研究了“必不可少的旁路(BOE)”-一种双基因遗传相互作用的未开发类型,它使必不可少的基因变得可有可无。通过分析裂殖酵母粟酒裂殖酵母的六个染色体臂之一上的必需基因,我们发现,值得注意的是,多达27%的它们可以通过BOE相互作用转化为非必需基因。使用此数据集,我们确定了必要性绕过的三个原理:可绕过的必需基因的重要性较低,倾向于在物种之间表现出不同的必需性,并且倾向于与其他可绕过的基因一起起作用。此外,我们描述了可绕过本质的基础机制,包括先前未知的旁系同源物之间的休眠冗余机制。关于可绕过的本质的新见解加深了我们对基因型与表型关系的理解,并将促进与必需基因相关的药物开发。

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