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A browser-based tool for visualization and analysis of diffusion MRI data

机译:基于浏览器的工具,用于可视化和分析扩散MRI数据

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Human neuroscience research faces several challenges with regards to reproducibility. While scientists are generally aware that data sharing is important, it is not always clear how to share data in a manner that allows other labs to understand and reproduce published findings. Here we report a new open source tool, AFQ-Browser, that builds an interactive website as a companion to a diffusion MRI study. Because AFQ-Browser is portable—it runs in any web-browser—it can facilitate transparency and data sharing. Moreover, by leveraging new web-visualization technologies to create linked views between different dimensions of the dataset (anatomy, diffusion metrics, subject metadata), AFQ-Browser facilitates exploratory data analysis, fueling new discoveries based on previously published datasets. In an era where Big Data is playing an increasingly prominent role in scientific discovery, so will browser-based tools for exploring high-dimensional datasets, communicating scientific discoveries, aggregating data across labs, and publishing data alongside manuscripts.
机译:人类神经科学研究在可再现性方面面临若干挑战。尽管科学家们普遍知道数据共享很重要,但并不总是很清楚如何以允许其他实验室理解和复制已发表发现的方式共享数据。在这里,我们报告了一个新的开放源代码工具AFQ-Browser,该工具构建了一个交互式网站,作为扩散MRI研究的伴侣。由于AFQ浏览器是便携式的-它可以在任何Web浏览器中运行-因此可以促进透明度和数据共享。此外,通过利用新的网络可视化技术在数据集的不同维度(解剖结构,扩散度量,主题元数据)之间创建链接视图,AFQ-Browser促进了探索性数据分析,并基于先前发布的数据集推动了新发现。在当今大数据在科学发现中扮演越来越重要的角色的时代,基于浏览器的工具也将用于探索高维数据集,交流科学发现,跨实验室汇总数据以及将数据与手稿一起发布。

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