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Large-Scale Domain Motions and Pyridoxal-5'-Phosphate Assisted Radical Catalysis in Coenzyme B12-Dependent Aminomutases †

机译:辅酶B 12 依赖的氨基酸突变酶中的大规模畴运动和Pyridoxal-5'-磷酸盐辅助的自由基催化†

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摘要

Lysine 5,6-aminomutase (5,6-LAM) and ornithine 4,5-aminomutase (4,5-OAM) are two of the rare enzymes that use assistance of two vitamins as cofactors. These enzymes employ radical generating capability of coenzyme B12 (5′-deoxyadenosylcobalamin, dAdoCbl) and ability of pyridoxal-5′-phosphate (PLP, vitamin B6) to stabilize high-energy intermediates for performing challenging 1,2-amino rearrangements between adjacent carbons. A large-scale domain movement is required for interconversion between the catalytically inactive open form and the catalytically active closed form. In spite of all the similarities, these enzymes differ in substrate specificities. 4,5-OAM is highly specific for d-ornithine as a substrate while 5,6-LAM can accept d-lysine and l-β-lysine. This review focuses on recent computational, spectroscopic and structural studies of these enzymes and their implications on the related enzymes. Additionally, we also discuss the potential biosynthetic application of 5,6-LAM.
机译:赖氨酸5,6-氨基变位酶(5,6-LAM)和鸟氨酸4,5-氨基变位酶(4,5-OAM)是使用两种维生素作为辅助因子的罕见酶中的两种。这些酶利用辅酶B 12 (5'-脱氧腺苷钴胺素,dAdoCbl)的自由基生成能力和吡ido醛5'-磷酸酯(PLP,维生素B 6 )的稳定能力高能中间体,用于在相邻碳原子之间进行具有挑战性的1,2-氨基重排。在催化惰性的开放形式和催化活性的封闭形式之间进行相互转化需要大规模的畴运动。尽管有所有相似之处,但这些酶的底物特异性不同。 4,5-OAM对d-鸟氨酸作为底物具有高度特异性,而5,6-LAM可以接受d-赖氨酸和1-β-赖氨酸。这篇综述着重于这些酶的最新计算,光谱和结构研究及其对相关酶的影响。此外,我们还讨论了5,6-LAM的潜在生物合成应用。

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