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Heterologous Expression and Characterization of Two 1-Hydroxy-2-Naphthoic Acid Dioxygenases from Arthrobacter phenanthrenivorans

机译:菲氏关节杆菌中的两种1-羟基-2-萘甲酸双加氧酶的异源表达和表征

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A protein fraction exhibiting 1-hydroxy-2-naphthoic acid (1-H2NA) dioxygenase activity was purified via ion exchange, hydrophobic interactions, and gel filtration chromatography from Arthrobacter phenanthrenivorans sp. nov. strain Sphe3 isolated from a Greek creosote-oil-polluted site. Matrix-assisted laser desorption ionization–time of flight mass spectrometry (MALDI-TOF MS) and tandem MS (MS-MS) analysis revealed that the amino acid sequences of oligopeptides of the major 45-kDa protein species, as analyzed by SDS-PAGE and silver staining, comprising 29% of the whole sequence, exhibited strong homology with 1-H2NA dioxygenase of Nocardioides sp. strain KP7. A BLAST search of the recently sequenced Sphe3 genome revealed two putative open reading frames, named diox1 and diox2 , showing 90% nucleotide identity to each other and 85% identity at the amino acid level with the Nocardia sp. homologue. diox1 was found on an indigenous Sphe3 plasmid, whereas diox2 was located on the chromosome. Both genes were induced by the presence of phenanthrene used as a sole carbon and energy source, and as expected, both were subject to carbon catabolite repression. The relative RNA transcription level of the chromosomal ( diox2 ) gene was significantly higher than that of its plasmid ( diox1 ) homologue. Both diox1 and diox2 putative genes were PCR amplified, cloned, and overexpressed in Escherichia coli . Recombinant E. coli cells expressed 1-H2NA dioxygenase activity. Recombinant enzymes exhibited Michaelis-Menten kinetics with an apparent K _( m ) of 35 μM for Diox1 and 29 μM for Diox2, whereas they showed similar kinetic turnover characteristics with K _(cat)/ K _( m ) values of 11 × 10~(6) M~(?1) s~(?1) and 12 × 10~(6) M~(?1) s~(?1), respectively. Occurrence of two diox1 and diox2 homologues in the Sphe3 genome implies that a replicative transposition event has contributed to the evolution of 1-H2NA dioxygenase in A. phenanthrenivorans .
机译:通过离子交换,疏水相互作用和凝胶过滤色谱法从节杆菌菲氏菌属菌种中纯化出具有1-羟基-2-萘甲酸(1-H2NA)双加氧酶活性的蛋白质级分。十一月菌株Sphe3分离自希腊creosote油污染的站点。基质辅助激光解吸电离-飞行时间质谱(MALDI-TOF MS)和串联质谱(MS-MS)分析显示,通过SDS-PAGE分析,主要的45 kDa蛋白质的寡肽氨基酸序列银染色占整个序列的29%,与Nocardioides sp。的1-H2NA双加氧酶具有很强的同源性。菌株KP7。对最近测序的Sphe3基因组进行的BLAST搜索显示了两个推定的开放阅读框,分别命名为diox1和diox2,它们与诺卡氏菌显示出90%的核苷酸同一性和85%的氨基酸同一性。同源物。在本地Sphe3质粒上发现了diox1,而diox2位于染色体上。这两个基因都是由作为唯一碳源和能源的菲的存在诱导的,并且正如预期的那样,两个基因都受到碳分解代谢物的抑制。染色体(diox2)基因的相对RNA转录水平明显高于其质粒(diox1)同源物。 diox1和diox2推定基因都在大肠杆菌中进行了PCR扩增,克隆和过表达。重组大肠杆菌细胞表达1-H2NA双加氧酶活性。重组酶表现出Michaelis-Menten动力学,其中Diox1的表观K _(m)为35μM,Diox2的表观K _(m)为29μM,而它们的K_(cat)/ K _(m)值为11×10,表现出相似的动力学转换特性。 〜(6)M〜(?1)s〜(?1)和12×10〜(6)M〜(?1)s〜(?1)。在Sphe3基因组中出现两个diox1和diox2同源物意味着一个复制性转位事件促成了A. phenanthrenivorans中1-H2NA双加氧酶的进化。

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