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Identification and Molecular Epidemiology of Campylobacter coli Isolates from Human Gastroenteritis, Food, and Animal Sources by Amplified Fragment Length Polymorphism Analysis and Penner Serotyping

机译:通过扩增的片段长度多态性分析和Penner血清分型法鉴定和鉴定来自人胃肠炎,食物和动物来源的弯曲杆菌菌株

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Campylobacter coli is an infrequently studied but important food-borne pathogen with a wide natural distribution. We investigated its molecular epidemiology by use of amplified fragment length polymorphism (AFLP)-based genotyping and Penner serotyping. Serotype reference strains and 177 Danish isolates of diverse origin identified by routine phenotyping as C. coli were examined. Molecular tools identified some 12% of field isolates as Campylobacter jejuni, emphasizing the need for improved identification methods in routine laboratories. Cluster analysis of AFLP profiles of 174 confirmed C. coli isolates revealed a difference in the distribution of isolates from pig and poultry (chicken, duck, turkey, and ostrich) species and indicated the various poultry species, but not pigs, to be likely sources of human C. coli infection. A poor correlation was observed between serotyping and AFLP profiling, suggesting that the former method has limited value in epidemiological studies of this species.
机译:弯曲杆菌是一种很少被研究但重要的食源性病原体,具有广泛的自然分布。我们通过使用基于扩增片段长度多态性(AFLP)的基因分型和Penner血清分型研究了其分子流行病学。检查了血清型参考菌株和177种通过常规表型鉴定为大肠杆菌的多种来源的丹麦分离株。分子工具将约12%的现场分离物鉴定为空肠弯曲菌,强调常规实验室需要改进的鉴定方法。对174株确诊的大肠埃希菌的AFLP图谱进行聚类分析,发现来自猪和家禽(鸡,鸭,火鸡和鸵鸟)的分离株分布有所不同,并表明可能是各种家禽而不是猪的物种人大肠杆菌感染。在血清分型和AFLP图谱之间观察到不良相关性,这表明前一种方法在该物种的流行病学研究中价值有限。

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