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Isolation and Characterization of Differentially Expressed Genes in the Mycelium and Fruit Body of Tuber borchii

机译:马铃薯块茎菌丝体和子实体中差异表达基因的分离与鉴定

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The transition from vegetative mycelium to fruit body in truffles requires differentiation processes which lead to edible fruit bodies (ascomata) consisting of different cell and tissue types. The identification of genes differentially expressed during these developmental processes can contribute greatly to a better understanding of truffle morphogenesis. A cDNA library was constructed from vegetative mycelium RNAs of the white truffle Tuber borchii, and 214 cDNAs were sequenced. Up to 58% of the expressed sequence tags corresponded to known genes. The majority of the identified sequences represented housekeeping proteins, i.e., proteins involved in gene or protein expression, cell wall formation, primary and secondary metabolism, and signaling pathways. We screened 171 arrayed cDNAs by using cDNA probes constructed from mRNAs of vegetative mycelium and ascomata to identify fruit body-regulated genes. Comparisons of signals from vegetative mycelium and fruit bodies bearing 15 or 70% mature spores revealed significant differences in the expression levels for up to 33% of the investigated genes. The expression levels for six highly regulated genes were confirmed by RNA blot analyses. The expression of glutamine synthetase, 5-aminolevulinic acid synthetase, isocitrate lyase, thioredoxin, glucan 1,3-β-glucosidase, and UDP-glucose:sterol glucosyl transferase was highly up-regulated, suggesting that amino acid biosynthesis, the glyoxylate cycle pathway, and cell wall synthesis are strikingly altered during morphogenesis.
机译:松露中从营养菌丝体到子实体的转变需要分化过程,这导致可食用的子实体(子囊)由不同的细胞和组织类型组成。在这些发育过程中差异表达基因的鉴定可以大大有助于更好地理解松露的形态发生。由白松露块茎块茎的营养菌丝体RNA构建cDNA文库,并对214个cDNA进行测序。高达58%的表达序列标签对应于已知基因。大部分鉴定的序列代表管家蛋白,即涉及基因或蛋白表达,细胞壁形成,一级和二级代谢以及信号传导途径的蛋白。我们使用从营养菌丝体和子囊的mRNA构建的cDNA探针筛选了171个排列的cDNA,以鉴定子实体调控的基因。营养菌丝体和带有15%或70%成熟孢子的子实体的信号比较显示,多达33%的研究基因表达水平存在显着差异。通过RNA印迹分析确认了六个高度调控的基因的表达水平。谷氨酰胺合成酶,5-氨基乙酰丙酸合成酶,异柠檬酸裂合酶,硫氧还蛋白,葡聚糖1,3-β-葡糖苷酶和UDP-葡萄糖:甾醇葡糖基转移酶的表达高度上调,表明氨基酸的生物合成,乙醛酸循环途径,并且细胞壁合成在形态发生过程中显着改变。

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