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首页> 外文期刊>Applied and Environmental Microbiology >Application of a Vital Fluorescent Staining Method for Simultaneous, Near-Real-Time Concentration Monitoring of Two Bacterial Strains in an Atlantic Coastal Plain Aquifer in Oyster, Virginia
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Application of a Vital Fluorescent Staining Method for Simultaneous, Near-Real-Time Concentration Monitoring of Two Bacterial Strains in an Atlantic Coastal Plain Aquifer in Oyster, Virginia

机译:生命荧光染色法在弗吉尼亚牡蛎大西洋沿海平原含水层中同时,近实时地监测两个细菌菌株的应用

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摘要

Two differentially labeled bacterial strains were monitored in near-real time during two field-scale bacterial transport experiments in a shallow aquifer in July 2000 and July 2001. Comamonas sp. strain DA001 and Acidovorax sp. strain OY-107 were grown and labeled with the vital fluorescent stain TAMRA/SE (5 [and -6]-carboxytetramethylrhodamine, succinimidyl ester) or CFDA/SE (5 [and -6]-carboxyfluorescein diacetate, succinimidyl ester). Fluorescently labeled cells and a conservative bromide tracer were introduced into a suboxic superficial aquifer, followed by groundwater collection from down-gradient multilevel samplers. Cells were enumerated in the field by microplate spectrofluorometry, with confirmatory analyses for selected samples done in the laboratory by epifluorescence microscopy, flow cytometry, and ferrographic capture. There was general agreement in the results from all of the vital-stain-based enumeration methods, with differences ranging from <10% up to 40% for the analysis of identical samples between different tracking methods. Field analysis by microplate spectrofluorometry was robust and efficient, allowing thousands of samples to be analyzed in quadruplicate for both of the injected strains. The near-real-time data acquisition allowed adjustments to the predetermined sampling schedule to be made. The microplate spectrofluorometry data sets for the July 2000 and July 2001 experiments allowed the transport of the injected cells to be related to the site hydrogeology and injection conditions and enabled the assessment of differences in the transport of the two strains. This near-real-time method should prove effective for a number of microbial ecology applications.
机译:在2000年7月和2001年7月的一个浅层含水层中,在两个田间规模的细菌迁移实验中,几乎实时地监测了两个差异标记的细菌菌株。 Comamonas sp。 DA001株和 Acidovorax sp。培养OY-107菌株,并用活荧光染料TAMRA / SE(5 [和-6]-羧基四甲基罗丹明,琥珀酰亚胺酯)或CFDA / SE(5 [和-6]-羧基荧光素二乙酸酯,琥珀酰亚胺酯)标记。将荧光标记的细胞和保守的溴化物示踪剂引入到低氧的浅层含水层中,然后从梯度下降的多级采样器中收集地下水。通过微板荧光光谱仪在现场对细胞进行计数,并通过落射荧光显微镜,流式细胞术和铁磁成像捕获对实验室中选择的样品进行确认分析。所有基于生命污点的枚举方法的结果均达成共识,不同追踪方法之间对相同样本的分析差异在<10%到40%之间。通过微孔板荧光光谱仪进行的现场分析功能强大且高效,可以对两个注入的菌株一式四份地分析成千上万的样品。近实时数据采集允许对预定采样时间表进行调整。 2000年7月和2001年7月实验的微孔板荧光光谱数据集使注入的细胞的运输与现场水文地质和注入条件有关,并能够评估两种菌株的运输差异。这种近实时的方法应被证明对许多微生物生态学应用有效。

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