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A response to Rome: lessons from pre- and post-publication data-sharing in the C. elegans research community

机译:对罗马的回应:秀丽隐杆线虫研究社区出版前和出版后数据共享的经验教训

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Background In recent years numerous studies have undertaken to measure the impact of patents, material transfer agreements, data-withholding and commercialization pressures on biomedical researchers. Of particular concern is the theory that such pressures may have negative effects on academic and other upstream researchers. In response to these concerns, commentators in some research communities have called for an increased level of access to, and sharing of, data and research materials. We have been studying how data and materials are shared in the community of researchers who use the nematode Caenorhabditis elegans (C. elegans) as a model organism for biological research. Specifically, we conducted a textual analysis of academic articles referencing C. elegans, reviewed C. elegans repository request lists, scanned patents that reference C. elegans and conducted a broad survey of C. elegans researchers. Of particular importance in our research was the role of the C. elegans Gene Knockout Consortium in the facilitation of sharing in this community. Results Our research suggests that a culture of sharing exists within the C. elegans research community. Furthermore, our research provides insight into how this sharing operates and the role of the culture that underpins it. Conclusions The greater scientific community is likely to benefit from understanding the factors that motivate C. elegans researchers to share. In this sense, our research is a 'response' to calls for a greater amount of sharing in other research communities, such as the mouse community, specifically, the call for increased investment and support of centralized resource sharing infrastructure, grant-based funding of data-sharing, clarity of third party recommendations regarding sharing, third party insistence of post-publication data sharing, a decrease in patenting and restrictive material transfer agreements, and increased attribution and reward.
机译:背景技术近年来,进行了许多研究来衡量专利,材料转让协议,数据保留和商业化压力对生物医学研究人员的影响。特别令人担忧的是,这种压力可能会对学术和其他上游研究人员产生负面影响的理论。针对这些担忧,一些研究社区的评论员呼吁提高对数据和研究材料的访问和共享水平。我们一直在研究如何利用线虫秀丽隐杆线虫(Ca. elegans)作为生物学研究的模型生物,在研究人员社区中共享数据和材料。具体来说,我们对引用秀丽隐杆线虫的学术文章进行了文本分析,审查了秀丽隐杆线虫的存储库请求列表,扫描了关于秀丽隐杆线虫的专利,并对秀丽隐杆线虫的研究者进行了广泛调查。在我们的研究中特别重要的是秀丽隐杆线虫基因敲除协会在促进社区共享中的作用。结果我们的研究表明,秀丽隐杆线虫研究社区内存在一种共享文化。此外,我们的研究提供了关于这种共享如何运作以及支撑这种文化的作用的见识。结论认识到促使秀丽隐杆线虫研究人员分享的因素可能会使更大的科学界受益。从这个意义上说,我们的研究是对“呼吁”在其他研究社区(例如鼠标社区)进行更多共享的“回应”,特别是呼吁增加投资和支持集中式资源共享基础架构,基于赠款的资助数据共享,第三方关于共享的建议的明确性,第三方坚持发布后数据共享,专利和限制性材料转让协议的减少以及归属和奖励的增加。

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