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首页> 外文期刊>BMC Genomics >Identification of genes underlying phenotypic plasticity of wing size via insulin signaling pathway by network-based analysis in Sogatella furcifera
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Identification of genes underlying phenotypic plasticity of wing size via insulin signaling pathway by network-based analysis in Sogatella furcifera

机译:通过基于网络的分析在茄子中的胰岛素信号转导途径鉴定机翼大小表型可塑性的潜在基因

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Phenotypic plasticity is a common and highly adaptive phenomenon where the same genotype produces different phenotypes in response to environmental cues. Sogatella furcifera, a migratory pest of rice exhibits wing dimorphism, is a model insect for studying phenotypic plasticity of wing size. The Insullin-PI3K-Akt-FOXO signaling pathway plays a crucial role in the manipulation of wing size in the migratory insects. However, the regulatory mechanism via the pathway involved in wing dimorphism are still unexplored. Accompanied by special alternative splicing, genes involved in muscle contraction and energy metabolism were highly expressed in the wing hinges of macropters, demonstrating their adaptation for energy-demanding long-distance flights. Based on FOXO ChIP-Seq analysis, a total of 1259 putative target genes were observed in the wing hinges, including wing morph development, flight muscle and energy metabolism genes. An integrated gene interaction network was built by combining four heterogeneous datasets, and the IIS-PI3K-Akt-FOXO pathway was clustered in a divided functional module. In total, 45 genes in the module directly interacting with the IIS-PI3K-Akt-FOXO pathway showed differential expression levels between the two wing hinges, thus are regarded as potential Insulin pathway mediated wing dimorphism related genes (IWDRGs). Of the 45 IWDRGs, 5 were selected for verification by gene knockdown experiments, and played significant roles in the insect wing size regulation. We provided valuable insights on the genetic basis of wing dimorphism, and also demonstrated that network analysis is a powerful approach to identify new genes regulating wing dimorphic development via insulin signaling pathway in the migratory insect.
机译:表型可塑性是一种常见且高度适应的现象,其中相同的基因型会根据环境提示产生不同的表型。 Sogatella furcifera是水稻的迁徙性害虫,表现出翅膀的双态性,是研究翅膀大小的表型可塑性的典范昆虫。 Insullin-PI3K-Akt-FOXO信号转导通路在迁徙昆虫的机翼大小操纵中起着至关重要的作用。然而,通过机翼二态性参与的途径的调节机制仍未探索。伴随着特殊的选择性剪接,参与肌肉收缩和能量代谢的基因在巨脚鸟的翅膀铰链中得到了高度表达,这表明它们可以适应需要能量的长途飞行。根据FOXO ChIP-Seq分析,在机翼铰链上共观察到1259个推定的靶基因,包括机翼形态发育,飞行肌和能量代谢基因。通过组合四个异构数据集构建了一个集成的基因交互网络,并将IIS-PI3K-Akt-FOXO路径聚集在一个分开的功能模块中。总共有45个与IIS-PI3K-Akt-FOXO途径直接相互作用的基因显示出两个翼铰链之间的表达水平差异,因此被认为是潜在的胰岛素途径介导的翼二态性相关基因(IWDRGs)。在45个IWDRGs中,有5个被选择用于基因敲低实验,并且在昆虫的翅膀大小调节中起着重要作用。我们提供了关于机翼二态性遗传基础的宝贵见解,并且还证明了网络分析是一种通过迁徙昆虫中的胰岛素信号途径识别调节机翼二态性发育的新基因的有力方法。

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