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Nonequilibrium Thermodynamics of Cell Signaling

机译:细胞信号传导的非平衡热力学

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摘要

Signal transduction inside and across the cells, also called cellular signaling, is key to most biological functions and is ultimately related with both life and death of the organisms. The processes giving rise to the propagation of biosignals are complex and extremely cooperative and occur in a far-from thermodynamic equilibrium regime. They are also driven by activation kinetics strongly dependent on local energetics. For these reasons, a nonequilibrium thermodynamical description, taking into account not just the activation of second messengers, but also transport processes and dissipation is desirable. Here we present a proposal for such a formalism, that considers cells as small thermodynamical systems and incorporates the role of fluctuations as intrinsic to the dynamics in a spirit guided by mesoscopic nonequilibrium thermodynamics. We present also a minimal model for cellular signaling that includes contributions from activation, transport, and intrinsic fluctuations. We finally illustrate its feasibility by considering the case of FAS signaling which is a vital signal transduction pathway that determines either cell survival or death by apoptosis.
机译:细胞内和细胞间的信号转导,也称为细胞信号转导,是大多数生物学功能的关键,并最终与生物的生与死有关。引起生物信号传播的过程非常复杂且相互配合,并且以远非热力学平衡的方式发生。它们也受强烈依赖于局部能量的活化动力学驱动。由于这些原因,不仅要考虑第二信使的激活,还要考虑运输过程和耗散,这是一种不平衡的热力学描述。在这里,我们提出了一种形式主义的建议,该提议将单元视为小型热力学系统,并在介观非平衡热力学指导的精神中纳入了波动固有的动力学作用。我们还提出了一种细胞信号传导的最小模型,包括激活,转运和内在波动的贡献。我们最后通过考虑FAS信号传导的情况来说明其可行性,FAS信号传导是决定细胞存活或细胞凋亡死亡的重要信号转导途径。

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