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首页> 外文期刊>Journal of Medicinal Plants Research >Assessment of genetic variation in Russian olive (Elaeagnus angustifolia) based on morphological traits and random amplified polymorphic DNA (RAPD) genetic markers
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Assessment of genetic variation in Russian olive (Elaeagnus angustifolia) based on morphological traits and random amplified polymorphic DNA (RAPD) genetic markers

机译:基于形态特征和随机扩增多态DNA(RAPD)遗传标记的俄罗斯橄榄(Elaeagnus angustifolia)遗传变异评估

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In this study, a combination of random amplification of polymorphic deoxyribonucleic acid (RAPD) marker and morphological traits were used to establish the level of genetic relationships and polymorphism among nine genotypes of?Elaeagnus angustifolia?collected from 9 different locations of West Azarbaijan province. RAPD analysis using 9 random primers generated 122 scorable loci, of which 103 were polymorphic (84.4%). The estimated Jaccard’s similarity coefficient ranged from 0.36 to 0.62 for RAPD marker. The cluster analysis was performed based on Unweighted Pair Group Method with Arithmetic Averages (UPGMA) and dendrogram plotted by help of NTSYSpc 2.02 software. The analysis revealed 4 main clusters for RAPD data. In morphological part, 20 traits were studied. Data analysis was carried out using NTSYSpc 2.02 software and genetic distance matrix obtained by MANHAT coefficient. Genetic distance coefficient ranged from 0.30 to 0.95 for morphological analysis. The dendrogram was plotted by help of UPGMA method in SAHN program and revealed 4 main clusters. According to our results, relatively high genetic distance among?E. angustifolia?genotypes suggests that?E. angustifolia?can be classified into subspecies level in West Azarbaijan province. Furthermore, it could be inferred that RAPD markers and morphological traits are suitable tools for evaluation of genetic diversity and relationships within?E. angustifolia.
机译:在这项研究中,结合使用多态性脱氧核糖核酸(RAPD)标记的随机扩增和形态性状,建立了从西阿扎拜疆省的9个不同地点收集的9个基因型“沙枣”的遗传关系和多态性的水平。使用9个随机引物进行的RAPD分析产生了122个可评分基因座,其中103个为多态性(84.4%)。对于RAPD标记,估计的Jaccard相似系数在0.36到0.62之间。聚类分析基于带算术平均值的非加权对组方法(UPGMA)和树状图,借助NTSYSpc 2.02软件绘制。分析揭示了RAPD数据的4个主要聚类。在形态学部分,研究了20个性状。使用NTSYSpc 2.02软件和通过MANHAT系数获得的遗传距离矩阵进行数据分析。形态学分析的遗传距离系数在0.30到0.95之间。通过UPGMA方法在SAHN程序中绘制树状图,并显示了4个主要簇。根据我们的结果,ΔE之间的遗传距离相对较高。 Angustifolia?基因型表明?西印度阿塞拜疆省可以将angustifolia?划分为亚种级别。此外,可以推断出RAPD标记和形态性状是评估遗传多样性及其内部关系的合适工具。桔梗。

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