首页> 外文期刊>Journal of Computational Biology and Bioinformatics Research >Distribution of insertion sequences in Tn1546 element in vancomycin-resistant Staphylococcus aureus in Sulaimani, Kurdistan of Iraq
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Distribution of insertion sequences in Tn1546 element in vancomycin-resistant Staphylococcus aureus in Sulaimani, Kurdistan of Iraq

机译:伊拉克库尔德斯坦苏拉马尼的耐万古霉素金黄色葡萄球菌Tn1546元件中插入序列的分布

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In 2008, nine clinical isolates of vancomycin-resistant?Staphylococcus aureus?containing Tn1546?were recovered in Sulaimani, Iraq. The genetic diversity in Tn1546-like elements has been documented previously. The differences described thus far have included the integration of insertion sequence (IS) elements IS1216V?and IS1251.?With?polymerase chain reaction?(PCR)?and?deoxyribonucleic acid?(DNA) sequence analysis of Tn1546, the distribution of ISs among 9?vanA-containing?S. aureus?isolates were investigated. Only one VRSA element was identical to the prototype Tn1546?element. Structural analyses of the?van?gene detected IS1216?and IS1251?in the genomes of 8 isolates. In addition, IS19?was detected in thevanS-vanH?region of one of the 8 isolates. Two of the 8?vancomycin-resistant?Staphylococcus aureus?(VRSA) elements showed a deletion, which eliminated the?orf1?region, and IS1216inserted in place of it and also another copy of IS1216?inserted into the?vanSH region.?The distribution of ISs associated with Tn1546-like elements among the Sulaimani isolates was found to be different from that of American vancomycin-resistant Staphylococci population. From this study, it was concluded that identification and analysis of the IS within the?vanA?gene could be a useful tool in epidemiological investigations.
机译:2008年,在伊拉克苏拉马尼市共回收了9株含有耐万古霉素的金黄色葡萄球菌Tn1546的临床分离株。 Tn1546样元素的遗传多样性先前已有文献记载。到目前为止所描述的差异包括插入序列(IS)元素IS1216V?和IS1251的整合。?通过Tn1546的聚合酶链反应(PCR)和脱氧核糖核酸(DNA)序列分析,IS的分布9?含vanA?S。对金黄色葡萄球菌进行了研究。只有一个VRSA元素与原型Tn1546?元素相同。 Van基因的结构分析在8个分离株的基因组中检测到IS1216和IS1251。另外,在8个分离株之一的vanS-vanHα区中检测到IS19? 8个耐万古霉素的金黄色葡萄球菌(VRSA)元件中有两个显示缺失,从而消除了orf1区域,并插入了IS1216,而另一个IS1216拷贝插入了vanSH区域。在苏莱曼尼分离株中与Tn1546-like元素相关的IS分布与美国耐万古霉素的葡萄球菌不同。从这项研究得出的结论是,对vanA?基因内IS的鉴定和分析可能是流行病学调查的有用工具。

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