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Towards an automated virtual slide screening: theoretical considerations and practical experiences of automated tissue-based virtual diagnosis to be implemented in the Internet

机译:迈向自动虚拟载玻片筛选:将在互联网上实施的基于组织的自动虚拟诊断的理论考虑和实践经验

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Aims To develop and implement an automated virtual slide screening system that distinguishes normal histological findings and several tissue – based crude (texture – based) diagnoses. Theoretical considerations Virtual slide technology has to handle and transfer images of GB Bytes in size. The performance of tissue based diagnosis can be separated into a) a sampling procedure to allocate the slide area containing the most significant diagnostic information, and b) the evaluation of the diagnosis obtained from the information present in the selected area. Nyquist's theorem that is broadly applied in acoustics, can also serve for quality assurance in image information analysis, especially to preset the accuracy of sampling. Texture – based diagnosis can be performed with recursive formulas that do not require a detailed segmentation procedure. The obtained results will then be transferred into a "self-learning" discrimination system that adjusts itself to changes of image parameters such as brightness, shading, or contrast. Methods Non-overlapping compartments of the original virtual slide (image) will be chosen at random and according to Nyquist's theorem (predefined error-rate). The compartments will be standardized by local filter operations, and are subject for texture analysis. The texture analysis is performed on the basis of a recursive formula that computes the median gray value and the local noise distribution. The computations will be performed at different magnifications that are adjusted to the most frequently used objectives (*2, *4.5, *10, *20, *40). The obtained data are statistically analyzed in a hierarchical sequence, and in relation to the clinical significance of the diagnosis. Results The system has been tested with a total of 896 lung cancer cases that include the diagnoses groups: cohort (1) normal lung – cancer; cancer subdivided: cohort (2) small cell lung cancer – non small cell lung cancer; non small cell lung cancer subdivided: cohort (3) squamous cell carcinoma – adenocarcinoma – large cell carcinoma. The system can classify all diagnoses of the cohorts (1) and (2) correctly in 100%, those of cohort (3) in more than 95%. The percentage of the selected area can be limited to only 10% of the original image without any increased error rate. Conclusion The developed system is a fast and reliable procedure to fulfill all requirements for an automated "pre-screening" of virtual slides in lung pathology.
机译:目的开发和实施自动的虚拟载玻片筛选系统,以区分正常的组织学发现和几种基于组织的原始(基于纹理)诊断。理论上的考虑虚拟幻灯片技术必须处理和传输大小为GB字节的图像。基于组织的诊断的执行情况可以分为:a)采样程序,分配包含最重要诊断信息的载玻片区域; b)从所选区域中存在的信息中获得的诊断评估。奈奎斯特定理广泛应用于声学领域,也可用于图像信息分析的质量保证,尤其是预设采样的准确性。基于纹理的诊断可以使用不需要详细分割程序的递归公式执行。然后将获得的结果传输到“自学习”判别系统中,该系统会根据图像参数(例如亮度,阴影或对比度)的变化进行自我调整。方法将根据Nyquist定理(预定义的错误率)随机选择原始虚拟幻灯片(图像)的非重叠部分。隔室将通过本地过滤器操作进行标准化,并接受纹理分析。纹理分析是基于递归公式执行的,该递归公式计算中值灰度值和局部噪声分布。计算将以不同的放大倍率执行,这些放大倍率被调整为最常用的物镜(* 2,* 4.5,* 10,* 20,* 40)。将获得的数据按层次结构顺序进行统计分析,并与诊断的临床意义相关。结果该系统已对总共896例肺癌病例进行了测试,其中包括诊断组:队列(1)正常肺癌–肺癌;细分的癌症:队列(2)小细胞肺癌–非小细胞肺癌;非小细胞肺癌细分为:队列(3)鳞状细胞癌-腺癌-大细胞癌。系统可以将100%的队列(1)和(2)的所有诊断正确分类,将95%以上的队列(3)的诊断正确分类。所选区域的百分比可以限制为原始图像的10%,而不会增加错误率。结论开发的系统是一种快速,可靠的程序,可以满足对肺部病理学中虚拟载玻片进行自动“预筛选”的所有要求。

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