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Leaf transcriptome data of two tropical medicinal plants: Sterculia lanceolata and Clausena excavata

机译:两种热带药用植物的叶片转录组数据: Sterculia lanceolata Clausena excavata

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The data presented in this article are associated to the research articles, “DOI: 10.1007/s11295-019-1348-3”, [1]; and “DOI: 10.1007/s13205-018-1162-x” [2].Clausena excavataBurm. f. andSterculia lanceolataCav. are medicinal tree plants [3,4] native to Southeast Asia and China, and most members of both the genusClausenaand the genusSterculiacontain various valuable secondary metabolites with a great potential for drug development. Though many phytochemical studies have been conducted using plant extracts from various parts of these plants [4,5], there are very limited genetic resources available. RNA sequencing ofC. excavataandS. lanceolatawas conducted using pair-end Illumina HiSeq2500 sequencing system, from which the firstde novotranscriptome data were produced for both genusClausenaandSterculia. Transcriptome shotgun assembly using three different assembly tools [2] generated a total of 16,638 non-redundant contigs (N50, 900 bp) fromC. excavataand 7,857 (N50, 423 bp) fromS. lanceolata. The data are accessible at NCBI BioProject: PRJNA428402 forC. excavata[2] or PRJNA435648 forS. lanceolata[1].
机译:本文提供的数据与研究文章“ DOI:10.1007 / s11295-019-1348-3” [1]相关;和“ DOI:10.1007 / s13205-018-1162-x” [2]。ClausenaexcavataBurm。 F。和Sterculia lanceolataCav。是药用树植物[3,4],原产于东南亚和中国,克劳森纳属和Sterculia属的大多数成员都包含各种有价值的次生代谢产物,具有很大的开发潜力。尽管已经使用这些植物各个部位的植物提取物进行了许多植物化学研究[4,5],但可用的遗传资源却非常有限。 C的RNA测序。挖角使用双末端Illumina HiSeq2500测序系统进行轮叶鞭毛,从中产生了克劳森纳氏菌和斯特氏菌属的第一个原始转录组数据。使用三种不同的组装工具[2]进行转录组shot弹枪组装,从C产生总共16,638个非冗余重叠群(N50,900 bp)。来自S.的7,857(N50,423 bp)。披针形。数据可在NCBI BioProject:PRJNA428402 forC中访问。 exavata [2]或PRJNA435648 forS。 lanceolata [1]。

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