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Proteins from Tuber magnatum Pico fruiting bodies naturally grown in different areas of Italy

机译:来自意大利不同地区自然生长的块茎魔芋子实体的蛋白质

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Background A number of Tuber species are ecologically important. The fruiting bodies of some of these also have value as a cooking ingredient due to the fact that they possess exceptional flavor and aromatic properties. In particular, T. magnatum fruiting bodies (commonly known as truffles), are greatly appreciated by consumers. These grow naturally in some parts of Italy. However, the quality of these fruiting bodies varies significantly depending on the area of origin due to differences in environmental growth conditions. It is therefore useful to be able to characterize them. A suitable method to reach this goal is to identify proteins which occur in the fruiting bodies that are specific to each area of origin. In this work protein profiles are described for samples coming from different areas and collected in two successive years. To our knowledge this is the first time that proteins of T. magnatum have been thoroughly examined. Results Using two dimensional electrophoresis, reproducible quantitative differences in the protein patterns (total 600 spots) of samples from different parts of Italy (accession areas) were revealed by bioinformatic analysis. 60 spots were chosen for further analysis, out of which 17 could probably be used to distinguish a sample grown in one area from a sample grown in another area. Mass spectrometry (MS) protein analysis of these seventeen spots allowed the identification of 17 proteins of T. magnatum. Conclusions The results indicate that proteomic analysis is a suitable method for characterizing those differences occurring in samples and induced by the different environmental conditions present in the various Italian areas where T. magnatum can grow. The positive protein identification by MS analysis has proved that this method can be applied with success even in a species whose genome, at the moment, has not been sequenced.
机译:背景技术许多块茎物种在生态上都很重要。其中一些子实体具有出色的风味和芳香特性,因此也具有作为烹饪原料的价值。尤其是,巨大的T. magnatum子实体(通常称为松露)受到消费者的赞赏。这些在意大利的某些地区自然生长。但是,由于环境生长条件的差异,这些子实体的质量因产地而异。因此,能够表征它们是有用的。实现此目标的合适方法是鉴定在子实体中出现的,对每个起源区域都特定的蛋白质。在这项工作中,描述了来自不同地区并连续两年收集的样品的蛋白质谱。据我们所知,这是首次对麻疯树蛋白质进行彻底检查。结果使用二维电泳,通过生物信息学分析揭示了来自意大利不同地区(登录地区)的样品的蛋白质模式(总共600个斑点)的可再现的定量差异。选择了60个斑点进行进一步分析,其中有17个斑点可以用来区分一个区域中生长的样品和另一区域中生长的样品。对这十七个斑点进行质谱(MS)蛋白质分析,可以鉴定麻疯树的17种蛋白质。结论结果表明,蛋白质组学分析是表征样品中出现的差异的合适方法,这些差异是由意大利不同地区(可能存在巨大魔芋)生长的不同环境条件引起的。通过质谱分析对蛋白质进行阳性鉴定,证明该方法即使在目前尚未对基因组测序的物种中也可以成功应用。

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