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VISUALIZATION OF WINTER WHEAT QUANTITATIVE TRAITS WITH PARALLEL COORDINATE PLOTS

机译:具有平行坐标图的冬小麦定量性状的可视化

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Visualization of multivariate multidimensional data sets is a challenging task, especially without use of adequate tools and methods. In the last few years, parallel coordinate plots became quite popular and accepted as a very efficient multivariate visualization technique. The aim of this paper was to explore how parallel coordinates can be used in analysis of winter wheat quantitative traits. Data set is obtained from experiment set up by a completely randomized design with two treatments and four replicates. Ten variables (plant height, spike length, stem length, plant weight, spike weight, grain weight per spike, 1000 kernel weight, number of fertile and sterile spikelets per spike and total number of spikelets per spike) and fifty-five winter wheat genotypes were analysed in this paper. In parallel coordinate plots observations are shown as series of unbroken lines, passing through parallel axes, where each axes represents a different variable. Advantage of parallel coordinates, compared to other visualization techniques, is that they can represent multivariate data in two dimensions. From such representation, outliers and grouping among observations are easily detectable. Correlation among variables can also be easily detected from suchrepresentation. Although parallel coordinates cannot efficiently explore details, they are a good technique for visualization of multivariate data sets and they can be used for exploratory analysis of wheat quantitative traits.
机译:多维多维数据集的可视化是一项艰巨的任务,尤其是在不使用适当工具和方法的情况下。在最近几年中,平行坐标图变得非常流行,并被公认为一种非常有效的多元可视化技术。本文旨在探讨如何将平行坐标用于冬小麦定量性状的分析。数据集是通过具有两种处理和四次重复的完全随机设计从实验设置中获得的。十个变量(十个变量)(株高,穗长,茎长,植物重,穗重,每个穗的粒重,1000粒重,每个穗的可育和无菌小穗数以及每个穗的小穗总数)和55个冬小麦基因型本文进行了分析。在平行坐标图中,观察结果显示为通过平行轴的一系列连续线,其中每个轴代表一个不同的变量。与其他可视化技术相比,平行坐标的优势在于它们可以表示二维多维数据。通过这种表示,可以轻松检测到观测值之间的异常值和分组。变量之间的相关性也可以从这种表示中容易地检测到。尽管平行坐标不能有效地探索细节,但它们是使多变量数据集可视化的一种好技术,并且可以用于小麦定量性状的探索性分析。

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