Bioinformatics analysis to identify action targets in NCI-N87 gastric cancer cells exposed to quercetin

摘要

Quercetin exerts antiproliferative effects on gastric cancer. However, its mechanisms of action on gastric cancer have not been comprehensively revealed. We investigated the mechanisms of action of quercetin against gastric cancer cells. Human NCI-N87 gastric cancer cells were treated with 15?μM quercetin or dimethyl sulfoxide (as a control) for 48?h. DNA isolated from cells was sequenced on a HiSeq 2500, and the data were used to identify differentially expressed genes (DEGs) between groups. Then, enrichment analyses were performed for DEGs and a protein-protein interaction (PPI) network was constructed. Finally, the transcription factors (TFs)-DEGs regulatory network was visualized by Cytoscape software. A total of 121 DEGs were identified in the quercetin group. In the PPI network, Fos proto-oncogene (FOS, degree?=?12), aryl hydrocarbon receptor (AHR, degree?=?12), Jun proto-oncogene (JUN, degree?=?11), and cytochrome P450 family 1 subfamily A member 1 (CYP1A1, degree?=?11) with higher degrees highly interconnected with other proteins. Of the 5 TF-DEGs, early growth response 1 (EGR1), FOS like 1 (FOSL1), FOS, and JUN were upregulated, while AHR was downregulated. Moreover, FOSL1, JUN, and Wnt family member 7B (WNT7B) were enriched in the Wnt signaling pathway. CYP1A1 highly interconnected with AHR in the PPI network. Therefore, FOS, AHR, JUN, CYP1A1, EGR1, FOSL1, and WNT7B might be targets of quercetin in gastric cancer.