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Enrichment of nitrous oxide reducing bacteria from coastal marsh sediments

机译:丰富沿海沼泽沉积物中的一氧化二氮还原细菌

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We attempted to recover organisms capable of respiratory nitrous oxide reduction with acetate as an electron donor from a variety of coastal marine sediments from Lavaca Bay area, Texas by use of liquid enrichment cultures. Putative positive cultures were analyzed by amplifying eubacterial and archaeal 16S rRNA gene fragments and analyzing their diversity by separating them by a denaturing gradient gel electrophoresis (DGGE). No Archaea was detected in our enrichments; however, positive enrichments from coastal salt marsh indicated the presence of putative nitrous oxide reducing bacteria. DGGE patterns of the amplified DNA were similar between enrichments, with ca. 7 obvious bands. The dominant bands were tentatively identified as members of the Gammaproteobacteria class, closely related to various denitrifying pseudomonads. Our results indicate that coastal marine environments may sustain a nitrous oxide reducing community, although nitrous oxide reduction is probably an opportunistic form of metabolism in that environment.
机译:我们试图通过液体富集培养从德克萨斯州拉瓦卡湾地区的各种沿海海洋沉积物中回收能够作为乙酸供体的醋酸盐作为电子供体的能够呼吸道一氧化二氮还原的生物。通过扩增真细菌和古细菌16S rRNA基因片段,并通过变性梯度凝胶电泳(DGGE)分离它们,分析推定的阳性培养物。在我们的浓缩物中未发现古生菌;然而,沿海盐沼的富集表明存在假定的一氧化二氮还原细菌。在富集之间,扩增的DNA的DGGE模式相似,大约为。 7个明显的乐队。主导带被初步确定为丙种变形细菌类成员,与各种反硝化假单胞菌密切相关。我们的结果表明,尽管减少一氧化二氮可能是该环境中新陈代谢的一种机会形式,但沿海海洋环境仍可能维持一氧化二氮的还原群落。

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