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Detection and evolutionary analysis of picobirnaviruses in treated wastewater

机译:污水中小核糖核酸病毒的检测和进化分析

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SummaryWastewater contains numerous viruses. In this study, picobirnaviruses (PBVs) were detected in the stream of a wastewater treatment plant in Changsha, Hunan province, China, and evolutionary analysis of the isolated PBVs was performed. The phylogenetic tree revealed that the PBVs were highly divergent and could be classified into six distinct groups according to their hosts. Among these groups, pairwise comparison of the six groups revealed that the nucleotide distance of group 4 (bootstrap value = 0.92; nucleotide identity = 94%) was the largest. Thus, group 4 might represent a new division of PBVs. Comprehensive analysis of the obtained PBV sequences to investigate their evolutionary history and phylodynamics revealed that group 5 (PBVs from monkey) exhibited maximum polymorphism (K = 30.582, S = 74, η = 98, Pa = 47) and lowest nucleotide substitutions per site per year (6.54E-3 subs per site per year), except group 4. Maximum clade credibility tree indicated that group 5 appeared earlier than the other groups. In conclusion, this study detected PBVs in treated wastewater in China, and identified a new PBV group. Furthermore, among these PBVs, group 5 was found to survive longer and present a balance between PBVs and their monkey host.
机译:总结废水中含有多种病毒。在这项研究中,在中国湖南省长沙市的污水处理厂的溪流中检测到了小核糖核酸病毒(PBV),并对分离出的PBV进行了进化分析。系统发育树表明,PBVs高度不同,可以根据其宿主分为六个不同的组。在这些组中,六个组的成对比较显示,第4组的核苷酸距离(引导值= 0.92;核苷酸同一性= 94%)最大。因此,第4组可能代表PBV的新部门。对获得的PBV序列进行综合分析以研究其进化历史和系统动力学发现,第5组(来自猴的PBV)表现出最大的多态性(K = 30.582,S = 74,η= 98,Pa = 47)和每个位点每个位点的核苷酸取代最低年份(每个站点每年6.54E-3个潜艇),第4组除外。最大进化枝信誉树表明,第5组比其他组更早出现。总之,本研究在中国处理过的废水中检测了PBV,并确定了一个新的PBV组。此外,在这些PBV中,发现第5组的生存时间更长,并且在PBV及其猴宿主之间保持平衡。

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