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A Highlights from MBoC Selection: Mechanistic mathematical model of polarity in yeast

机译:MBoC选择的亮点:酵母中极性的机械数学模型

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The establishment of cell polarity involves positive-feedback mechanisms that concentrate polarity regulators, including the conserved GTPase Cdc42p, at the “front” of the polarized cell. Previous studies in yeast suggested the presence of two parallel positive-feedback loops, one operating as a diffusion-based system, and the other involving actin-directed trafficking of Cdc42p on vesicles. F-actin (and hence directed vesicle traffic) speeds fluorescence recovery of Cdc42p after photobleaching, suggesting that vesicle traffic of Cdc42p contributes to polarization. We present a mathematical modeling framework that combines previously developed mechanistic reaction-diffusion and vesicle-trafficking models. Surprisingly, the combined model recapitulated the observed effect of vesicle traffic on Cdc42p dynamics even when the vesicles did not carry significant amounts of Cdc42p. Vesicle traffic reduced the concentration of Cdc42p at the front, so that fluorescence recovery mediated by Cdc42p flux from the cytoplasm took less time to replenish the bleached pool. Simulations in which Cdc42p was concentrated into vesicles or depleted from vesicles yielded almost identical predictions, because Cdc42p flux from the cytoplasm was dominant. These findings indicate that vesicle-mediated delivery of Cdc42p is not required to explain the observed Cdc42p dynamics, and raise the question of whether such Cdc42p traffic actually contributes to polarity establishment.
机译:细胞极性的建立涉及正反馈机制,该机制将极性调节剂(包括保守的GTPase Cdc42p)集中在极化细胞的“前部”。酵母中的先前研究表明,存在两个平行的正反馈回路,一个作为基于扩散的系统运行,另一个涉及肌动蛋白定向的Cdc42p在囊泡上的运输。 F-肌动蛋白(并因此定向的囊泡运输)加快了光漂白后Cdc42p的荧光恢复,表明Cdc42p的囊泡运输有助于极化。我们提出了一个数学建模框架,该框架结合了以前开发的机械反应扩散和囊泡贩运模型。出人意料的是,即使囊泡中没有携带大量的Cdc42p,该组合模型也概括了囊泡运输对Cdc42p动力学的影响。囊泡运输降低了前部Cdc42p的浓度,因此由细胞质中的Cdc42p通量介导的荧光恢复花费了更少的时间来补充漂白液。 Cdc42p集中到囊泡中或从囊泡中耗尽的模拟产生几乎相同的预测,因为来自细胞质的Cdc42p通量占主导地位。这些发现表明,不需要囊泡介导的Cdc42p来解释观察到的Cdc42p动力学,并提出了这样的Cdc42p流量是否确实有助于极性建立的问题。

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