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Genomic and Transcriptomic Associations Identify a New Insecticide Resistance Phenotype for the Selective Sweep at the Cyp6g1 Locus of Drosophila melanogaster

机译:基因组和转录组学协会为果蝇Cyp6g1位点的选择性扫除确定了新的杀虫剂抗性表型。

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Scans of the Drosophila melanogaster genome have identified organophosphate resistance loci among those with the most pronounced signature of positive selection. In this study, the molecular basis of resistance to the organophosphate insecticide azinphos-methyl was investigated using the Drosophila Genetic Reference Panel, and genome-wide association. Recently released full transcriptome data were used to extend the utility of the Drosophila Genetic Reference Panel resource beyond traditional genome-wide association studies to allow systems genetics analyses of phenotypes. We found that both genomic and transcriptomic associations independently identified [Cyp6g1][1] , a gene involved in resistance to DDT and neonicotinoid insecticides, as the top candidate for azinphos-methyl resistance. This was verified by transgenically overexpressing [Cyp6g1][1] using natural regulatory elements from a resistant allele, resulting in a 6.5-fold increase in resistance. We also identified four novel candidate genes associated with azinphos-methyl resistance, all of which are involved in either regulation of fat storage, or nervous system development. In [Cyp6g1][1] , we find a demonstrable resistance locus, a verification that transcriptome data can be used to identify variants associated with insecticide resistance, and an overlap between peaks of a genome-wide association study, and a genome-wide selective sweep analysis. [1]: http://flybase.org/reports/FBgn0025454.html
机译:果蝇果蝇基因组的扫描已确定有机磷酸酯抗性基因座中那些具有最明显的阳性选择特征的基因座。在这项研究中,使用果蝇遗传参考小组和全基因组关联性研究了对有机磷酸酯杀虫剂谷硫磷-甲基的抗性的分子基础。最近发布的完整转录组数据用于将果蝇遗传参考专家组资源的实用性扩展到传统的全基因组关联研究之外,从而可以对表型进行系统遗传学分析。我们发现,基因组和转录组学关联都独立地确定了[Cyp6g1] [1],这是一种对DDT和新烟碱类杀虫剂具有抗性的基因,是抗谷硫磷的最佳候选基因。使用抗性等位基因的天然调控元件通过转基因过表达[Cyp6g1] [1]证实了这一点,导致抗性提高了6.5倍。我们还确定了四个与谷硫磷甲基抗性相关的新候选基因,所有这些基因均参与脂肪储存的调节或神经系统发育。在[Cyp6g1] [1]中,我们找到了可证明的抗药性基因座,证实了转录组数据可用于鉴定与杀虫剂抗药性相关的变异体,以及全基因组关联研究的峰之间的重叠以及全基因组选择性扫描分析。 [1]:http://flybase.org/reports/FBgn0025454.html

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