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Salivary biomarker development using genomic, proteomic and metabolomic approaches

机译:利用基因组学,蛋白质组学和代谢组学方法开发唾液生物标志物

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摘要

The use of saliva as a diagnostic sample provides a non-invasive, cost-efficient method of sample collection for disease screening without the need for highly trained professionals. Saliva collection is far more practical and safe compared with invasive methods of sample collection, because of the infection risk from contaminated needles during, for example, blood sampling. Furthermore, the use of saliva could increase the availability of accurate diagnostics for remote and impoverished regions. However, the development of salivary diagnostics has required technical innovation to allow stabilization and detection of analytes in the complex molecular mixture that is saliva. The recent development of cost-effective room temperature analyte stabilization methods, nucleic acid pre-amplification techniques and direct saliva transcriptomic analysis have allowed accurate detection and quantification of transcripts found in saliva. Novel protein stabilization methods have also facilitated improved proteomic analyses. Although candidate biomarkers have been discovered using epigenetic, transcriptomic, proteomic and metabolomic approaches, transcriptomic analyses have so far achieved the most progress in terms of sensitivity and specificity, and progress towards clinical implementation. Here, we review recent developments in salivary diagnostics that have been accomplished using genomic, transcriptomic, proteomic and metabolomic approaches.
机译:唾液作为诊断样本的使用为疾病筛查提供了一种无创,经济高效的样本采集方法,而无需训练有素的专业人员。与侵入式采样方法相比,唾液采集要实用和安全得多,因为在例如血液采样过程中,受污染的针头会导致感染风险。此外,唾液的使用可以增加对偏远和贫困地区进行准确诊断的可用性。然而,唾液诊断的发展需要技术创新以允许稳定和检测作为唾液的复杂分子混合物中的分析物。具有成本效益的室温分析物稳定方法,核酸预扩增技术和直接唾液转录组学分析的最新发展已使准确检测和定量唾液中发现的转录本成为可能。新型蛋白质稳定化方法还有助于改善蛋白质组学分析。尽管已使用表观遗传学,转录组学,蛋白质组学和代谢组学方法发现了候选生物标志物,但迄今为止,转录组学分析在敏感性和特异性方面以及在临床实施方面均取得了最大进展。在这里,我们回顾了唾液诊断的最新进展,这些进展已使用基因组学,转录组学,蛋白质组学和代谢组学方法完成。

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