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Prevalence of Salmonella enterica serovar 4,[5],12:i:- in England and Wales, 2010

机译:肠炎沙门氏菌4,[5],12:i:-在英格兰和威尔士的患病率,2010年

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Difficulties in accurately identifying serovar 4,[5],12:i:- as monophasic variants of Salmonella enterica serovar Typhimurium mean there is confusion in the reporting of serovars Typhimurium and 4,[5],12:i:-. To gain insight into the prevalence and diversity of these monophasic variants in England and Wales, screening for fljB, hin and the serovar 4,[5],12:i:- DT193-associated genomic island was conducted on 609 S. enterica isolates designated as definitive phage type (DT) 193, and 142 isolates serologically-defined as monophasic variants of serovar Typhimurium but belonging to phage types other than DT193. All latter 142 isolates were subtyped by multilocus variable-number tandem repeat analysis (MLVA). MLVA was also applied to 70 DT193 serologically-defined monophasic variant isolates. Results indicate that serovar 4,[5],12:i:- accounted for 108 of 209 (52%) of DT193 isolates with available serological data and 99 of 142 (70%) monophasic variant isolates belonging to other phage types. Of 609 DT193 isolates, 463 (76%) lacked fljB and hin. Moreover, genetically-related isolates of DTs 120, 191, 191a, 195, phage types U311 and U323, and reacts but does not conform (RDNC) and untypable (UT) strains were also lacking either hin and/or fljB. Of note, the serovar 4,[5],12:i:- DT193-associated genomic island was identified in not only 458 of 463 (99%) monophasic DT193 isolates, but also 25 of 139 (18%) biphasic DT193 isolates and 56 of 76 (74%) monophasic variants of other phage types. Accurate monitoring of the emergence of serovar 4,[5],12:i:- isolates is important to ascertain the public health impact of these strains; since 2012 the Health Protection Agency's Salmonella Reference Unit has therefore begun determining full antigenic structures of all presumptive O:4 isolates in addition to routinely performing phage typing for identification of variants of serovar Typhimurium. .
机译:难以准确鉴定血清型4,[5],12:i:-作为肠炎沙门氏菌血清型的单相变体意味着在血清型鼠伤寒和4,[5],12:i:-的报道中存在混淆。为了深入了解这些单相变体在英格兰和威尔士的流行和多样性,在指定的609个肠炎沙门氏菌菌株中筛选了fljB,hin和血清型4 [5],12:i:-DT193相关的基因组岛。作为确定性噬菌体类型(DT)193和142的分离株,在血清学上被定义为鼠伤寒沙门氏菌的单相变体,但属于除DT193以外的噬菌体类型。通过多基因座可变数串联重复分析(MLVA)将所有后142个分离株亚型化。 MLVA还应用于70种DT193血清学定义的单相变体分离株。结果表明,血清型4,[5],12:i:-占可用血清学数据的DT193分离株的209株中的108株(52%),以及其他噬菌体类型的142株(70%)的单相变种99株。在609个DT193分离株中,有463个(76%)缺乏fljB和hin。此外,DT 120、191、191a,195,U311和U323型噬菌体的遗传相关分离株,也有反应但不符合规定(RDNC)和不可分型(UT)菌株,也缺少hin和/或fljB。值得注意的是,不仅在463(99%)个单相DT193分离株中的458个,而且在139个(18%)DT193双相分离株中,有25个(18%)DT193相关的基因岛与血清素4,[5],12:i:-相关。其他噬菌体类型的76个(56%)单相变体中的56个。准确监测血清4,[5],12:i:-分离株的出现对于确定这些菌株对公共卫生的影响很重要。因此,自2012年以来,除了常规进行噬菌体分型以鉴定鼠伤寒沙门氏菌变体之外,健康保护局的沙门氏菌参考单位已经开始确定所有推定的O:4分离株的完整抗原结构。 。

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