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首页> 外文期刊>EURASIP journal on bioinformatics and systems biology >Compressing Proteomes: The Relevance of Medium Range Correlations
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Compressing Proteomes: The Relevance of Medium Range Correlations

机译:压缩蛋白质组:中程相关性的相关性

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摘要

We study the nonrandomness of proteome sequences by analysing the correlations that arise between amino acids at a short and medium range, more specifically, between amino acids located 10 or 100 residues apart; respectively. We show that statistical models that consider these two types of correlation are more likely to seize the information contained in protein sequences and thus achieve good compression rates. Finally, we propose that the cause for this redundancy is related to the evolutionary origin of proteomes and protein sequences.
机译:我们通过分析在短和中等范围内的氨基酸之间发生的相关性,更具体地说是在相距10或100个残基的氨基酸之间产生的相关性,来研究蛋白质组序列的非随机性。分别。我们表明,考虑这两种类型的相关性的统计模型更可能抓住蛋白质序列中包含的信息,从而获得良好的压缩率。最后,我们提出这种冗余的原因与蛋白质组和蛋白质序列的进化起源有关。

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