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An asynchronous writing method for restart files in the gysela code in prevision of exascale systems

机译:在Exascale系统中使用gysela代码重新启动文件的异步写入方法

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The present work deals with an optimization procedure developed in the full-f global GYrokinetic SEmi-LAgrangian code (GYSELA). Optimizing the writing of the restart files is necessary to reduce the computing impact of crashes. These files require a very large memory space, and particularly so for very large mesh sizes. The limited bandwidth of the data pipe between the comput- ing nodes and the storage system induces a non-scalable part in the GYSELA code, which increases with the mesh size. Indeed the transfer time of RAM to data depends linearly on the files size. The necessity of non synchronized writing-in-file procedure is therefore crucial.A new GYSELA module has been developed. This asynchronous procedure allows the frequent writ- ing of the restart files, whilst preventing a severe slowing down due to the limited writing bandwidth. This method has been improved to generate a checksum control of the restart files, and automatically rerun the code in case of a crash for any cause.
机译:本工作涉及以全f全局Gyrokinetic SEmi-Lagrangian码(GYSELA)开发的优化程序。优化重新启动文件的写入对于减少崩溃的计算影响是必要的。这些文件需要很大的存储空间,尤其是对于很大的网格物体。计算节点和存储系统之间数据管道的有限带宽在GYSELA代码中引起了不可缩放的部分,该部分随网格大小而增加。实际上,RAM到数据的传输时间线性地取决于文件的大小。因此,非同步写入过程的必要性至关重要。已开发了新的GYSELA模块。这种异步过程允许重新启动文件的频繁写入,同时防止由于写入带宽有限而导致的严重减速。改进了该方法,以生成重新启动文件的校验和控制,并在由于任何原因导致崩溃的情况下自动重新运行代码。

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