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Differential Evolution of Duplicated Medakafish mitf Genes

机译:重复的Medakafish mitf基因的差异进化

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Gene duplication is a major force of evolution. One whole genome duplication (WGD) event in the fish ancestor generated genome-wide duplicates in all modern species. Coloration and patterning on the animal body surface exhibit enormous diversity, representing a mysterious and ideal system for understanding gene evolution. Surface colors and patterns are determined primarily by pigment cells in the skin and eye. Thus, microphthalmia-associated transcription factor (Mitf) as a master regulator of melanocyte development is excellent for studying the evolution of WGD-derived gene duplicates. Here we report the evolution of mitf duplicate, mitf1 and mitf2, in the fish medaka (Oryzias latipes), which encode medaka co-homologs Mitf1 and Mitf2 of the mouse Mitf. Compared to mitf1, mitf2 exhibits an accelerated sequence divergence and loses melanocytic expression in embryos at critical developmental stages. Compared to a Xiphophorus counterpart, the medaka Mitf2 displayed a reduced activity in activating melanogenic gene expression by reporter assays and RT-PCR analyses. We show that the medaka Mitf2 has the ability to induce melanocyte differentiation in medaka embryonic stem cells but at a remarkably reduced efficiency compared to the Xiphophorus counterpart. Our data suggest differential evolution of the medaka mitf duplicate, with mitf1 adopting conservation and mitf2 employing degeneration, which is different from the duplication-degeneration-complementation proposed as the mechanism to preserve many gene duplicates in zebrafish. Our finding reveals species-specific variations for mitf duplicate evolution, in agreement with enormous diversity of body coloration and patterning.
机译:基因复制是进化的主要力量。鱼祖先的一个全基因组复制(WGD)事件在所有现代物种中产生了全基因组复制。动物体表面的着色和图案表现出极大的多样性,代表了一种理解基因进化的神秘而理想的系统。表面颜色和图案主要由皮肤和眼睛中的色素细胞决定。因此,作为研究黑素细胞发育的主要调节因子的小眼科相关转录因子(Mitf)对于研究WGD衍生的基因重复序列的进化非常出色。在这里,我们报告了鱼medaka(Oryzias latipes)中mitf重复体mitf1和mitf2的进化,该鱼编码了老鼠Mitf的medaka同系物Mitf1和Mitf2。与mitf1相比,mitf2在关键的发育阶段在胚胎中表现出加速的序列趋异性并失去黑素细胞表达。与Xiphophorus对应物相比,Medaka Mitf2在报道基因分析和RT-PCR分析中在激活黑色素基因表达方面活性降低。我们显示,medaka Mitf2具有在medaka胚胎干细胞中诱导黑素细胞分化的能力,但与Xiphophorus对应物相比效率显着降低。我们的数据表明,medaka mitf重复序列的差异进化,其中mitf1采用保守性,而mitf2采用变性,这与提出的保留斑马鱼中许多基因重复的机制的重复-变性-互补不同。我们的发现揭示了mitf复制进化的特定物种变异,与人体着色和图案的巨大差异相符。

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