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Impact of Differential Detergent Interactions on Transmembrane Helix Dimerization Affinities

机译:差异洗涤剂相互作用对跨膜螺旋二聚亲和力的影响

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Interactions between transmembrane (TM) helices play a critical role in the fundamental processes required for cells to communicate and exchange materials with their surroundings. Our understanding of the factors that promote TM helix interactions has greatly benefited from our ability to study these interactions in the solution phase through the use of membrane-mimetic micelles. However, less is known about the potential influence of juxtamembrane regions flanking the interacting TM helices that may modulate dimerization affinities, even when the interacting surface itself is not altered. To investigate this question, we used solution NMR to quantitate the dimerization affinity of the major coat protein from the M13 bacteriophage in sodium dodecyl sulfate (SDS), a well-characterized model of a single-spanning self-associating TM protein. Here, we showed that a shorter construct lacking the N-terminal amphipathic helix has a higher dimerization affinity relative to that of the full-length protein, with no change in the helical structure between the monomeric and dimeric states in both cases. Although this translated into a 0.6 kcal/mol difference in free energy when the SDS solvent was approximated as a continuous phase, there were deviations from this model at high protein to detergent ratios. Instead, the equilibria were better fit to a model that treats the empty micelle as an active participant in the reaction, giving rise to standard free energies of association that were the same for both full-length and TM-segment constructs. According to this model, the higher apparent affinity of the shorter peptide could be completely explained by the enhanced detergent binding by the monomer relative to that bound by the dimer. Therefore, differential detergent binding between the monomeric and dimeric states provides a mechanism by which TM helix interactions can be modulated by noninteracting juxtamembrane regions.
机译:跨膜(TM)螺旋之间的相互作用在细胞与周围环境交流和交换物质所需的基本过程中起着至关重要的作用。我们通过使用膜模拟胶束在溶液相中研究这些相互作用的能力,大大促进了我们对促进TM螺旋相互作用的因素的理解。然而,关于相互作用的TM螺旋侧翼的近膜区域可能影响二聚化亲和力的潜在影响知之甚少,即使相互作用表面本身未改变也是如此。为了研究这个问题,我们使用溶液NMR定量了十二烷基硫酸钠(SDS)中M13噬菌体中主要外壳蛋白的二聚化亲和力,十二烷基硫酸钠是一个特征广泛的单跨度自缔合TM蛋白模型。在这里,我们表明缺少N末端两亲性螺旋的较短构建体相对于全长蛋白质具有更高的二聚化亲和力,在两种情况下单体和二聚体状态之间的螺旋结构均没有变化。尽管当将SDS溶剂近似为连续相时,这转化为自由能相差0.6 kcal / mol,但在蛋白质与去污剂比率较高的情况下,该模型存在偏差。相反,平衡更适合于将空胶束视为反应的积极参与者的模型,从而产生与全长和TM段构建体相同的标准缔合自由能。根据该模型,较短的肽的较高的表观亲和力可以通过单体相对于二聚体结合的去污剂结合增强来完全解释。因此,单体和二聚体状态之间不同的去污剂结合提供了一种机制,通过该机制,可以通过非相互作用的近膜区来调节TM螺旋相互作用。

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