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Stability Analysis for the Cellular Signaling Systems Composed of Two Phosphorylation-Dephosphorylation Cyclic Reactions

机译:两个磷酸化-去磷酸化循环反应组成的细胞信号系统的稳定性分析

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The regulatory mechanisms in cellular signaling systems have been studied intensively from the viewpoint that the malfunction of the regulation is thought to be one of the substantial causes of cancer formation. On the other hand, it is rather difficult to develop the theoretical framework for investigation of the regulatory mechanisms due to their complexity and nonlinearity. In this study, more general approach is proposed for elucidation of characteristics of the stability in cellular signaling systems by construction of mathematical models for a class of cellular signaling systems and stability analysis of the models over variation of the network architectures and the parameter values. The model system is formulated as regulatory network in which every node represents a phosphorylation-dephosphorylation cyclic reaction for respective constituent enzyme. The analysis is performed for all variations of the regulatory networks comprised of two nodes with multiple feedback regulation loops. It is revealed from the analysis that the regulatory networks become mono-stable, bi-stable, tri-stable, or oscillatory and that the negative mutual feedback or positive mutual feedback is favorable for multi-stability, which is augmented by a negatively regulated node with a positive auto-regulation. Furthermore, the multi-stability or the oscillation is more likely to emerge in the case of low value of the Michaelis constant than in the case of high value, implying that the condition of higher saturation levels induces stronger nonlinearity in the networks. The analysis for the parameter regions yielding the multi-stability and the oscillation clarified that the stronger regulation shifts the systems toward multi-stability.
机译:从认为调节失灵是癌症形成的重要原因之一的观点出发,已经对细胞信号系统中的调节机制进行了深入研究。另一方面,由于监管机制的复杂性和非线性,很难为研究监管机制建立理论框架。在这项研究中,提出了一种更通用的方法来阐明一类蜂窝信令系统的数学模型,并根据网络架构和参数值的变化对该模型进行稳定性分析,以阐明蜂窝信令系统中的稳定性特征。该模型系统被表述为调节网络,其中每个节点代表各个组成酶的磷酸化-去磷酸化环状反应。针对由具有多个反馈调节回路的两个节点组成的调节网络的所有变体进行分析。从分析中可以看出,调节网络变得单稳态,双稳态,三稳态或振荡,并且负的相互反馈或正的相互反馈对于多重稳定性是有利的,而负面的节点会增强这种稳定性。具有积极的自动调节功能。此外,在米氏常数较低的情况下,比在较高值的情况下,更有可能出现多重稳定性或振荡,这意味着较高饱和度的条件会引起网络中更强的非线性。对产生多稳定性和振荡的参数区域的分析表明,更强的调节将系统移向多稳定性。

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