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Application of Hartree-Fock Method for Modeling of Bioactive Molecules Using SAR and QSPR

机译:Hartree-Fock方法在SAR和QSPR建模生物活性分子中的应用

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The central importance of quantum chemistry is to obtain solutions of the Schr?dinger equation for the accurate determination of the properties of atomic and molecular systems that occurred from the calculation of wave functions accurate for many diatomic and polyatomic molecules, using Self Consistent Field method (SCF). The application of quantum chemical methods in the study and planning of bioactive compounds has become a common practice nowadays. From the point of view of planning it is important to note, when it comes to the use of molecular modeling, a collective term that refers to methods and theoretical modeling and computational techniques to mimic the behavior of molecules, not intend to reach a bioactive molecule simply through the use of computer programs. The choice of method for energy minimization depends on factors related to the size of the molecule, parameters of availability, stored data and computational resources. Molecular models generated by the computer are the result of mathematical equations that estimate the positions and properties of the electrons and nuclei, the calculations exploit experimentally, the characteristics of a structure, providing a new perspective on the molecule. In this work we show that studies of Highest Occupied Molecular Orbital Energy (HOMO), Low Unoccupied Molecular Orbital Energy (LUMO) and Map of molecular electrostatic potential (MEP) using Hatree-Fock method with different basis sets (HF/3-21G*, HF/3-21G**, HF/6-31G, HF/6-31G*, HF/6-31G** and HF/6-311G), that are of great importance in modern chemistry, biochemistry, molecular biology, and other fields of knowledge of health sciences. In order to obtain a significant correlation, it is essential that the descriptors are used appropriately. Thus, the quantum chemical calculations are an attractive source of new molecular descriptors that can, in principle, express all the geometrical and electronic properties of molecules and their interactions with biological receptor.
机译:量子化学的中心重要性是使用自洽场方法(Self Consistent Field method),通过精确计算许多双原子和多原子分子的波函数,获得薛定er方程的解,以精确确定原子和分子系统的性质( SCF)。量子化学方法在生物活性化合物的研究和规划中的应用已成为当今的普遍做法。从计划的角度来看,重要的是要注意,当涉及分子建模时,它是一个通用术语,指的是模仿分子行为而不是意图达到生物活性分子的方法,理论建模和计算技术只需通过使用计算机程序即可。能量最小化方法的选择取决于与分子大小,可用性参数,存储的数据和计算资源有关的因素。由计算机生成的分子模型是数学方程式的结果,该数学方程式估计了电子和原子核的位置和性质,这些计算是通过实验利用的,结构的特征,为分子提供了新的视角。在这项工作中,我们展示了使用Hatree-Fock方法(不同的基集)(HF / 3-21G *)对最高占用分子轨道能(HOMO),低空分子轨道能(LUMO)和分子静电势图(MEP)的研究。 ,HF / 3-21G **,HF / 6-31G,HF / 6-31G *,HF / 6-31G **和HF / 6-311G),它们在现代化学,生物化学,分子生物学中非常重要,以及其他健康科学知识领域。为了获得显着的相关性,必须正确使用描述符。因此,量子化学计算是新的分子描述子的诱人来源,这些分子描述子原则上可以表达分子的所有几何和电子特性以及它们与生物受体的相互作用。

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