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Enterococcus and Streptococcus spp. associated with chronic and self-medicated urinary tract infections in Vietnam

机译:肠球菌和链球菌属。与越南的慢性和自疗性尿路感染相关

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Background Urinary tract infections (UTI) are one of the most common infections among women worldwide. E. coli often causes more than 75% of acute uncomplicated UTI, however, little is known about how recurrent UTIs and indiscriminate use of antimicrobials affect the aetiology of UTIs. This study aimed to establish the aetiology of UTI in a population of recurrent and self-medicated patients referred from pharmacies to a hospital in Hanoi, Vietnam and to describe genotypes and antimicrobial susceptibility of the associated bacterial pathogens. The aetiology of bacterial pathogens associated with UTI (defined as ≥ 104 CFU/ml urine) was established by phenotypic and molecular methods. Enterococcus faecalis isolates were typed by Multi Locus Sequence Typing (MLST), Pulsed-Field Gel Electrophoresis (PFGE) and antimicrobial susceptibility testing. Methods Urine samples from 276 patients suffering symptoms of urinary tract infection were collected and cultured on Flexicult agar? allowing for detection of the most common urine pathogens. Patients were interviewed about underlying diseases, duration of symptoms, earlier episodes of UTI, number of episodes diagnosed by doctors and treatment in relation to UTI. All tentative E. faecalis and E. faecium isolates were identified to species level by PCR, 16S rRNA and partial sequencing of the groEL gene. E. faecalis isolates were further characterized by Multi Locus Sequence Typing and antimicrobial susceptibility testing. Results Mean age of 49 patients was 48 yrs (range was 11–86 yrs) and included 94% women. On average, patients reported to have suffered from UTI for 348 days (range 3 days-10 years, and experienced 2.7 UTIs during the previous year). Cephalosporins were reported the second drug of choice in treatment of UTI at the hospital. E. faecalis (55.1%), E. coli (12.2%) and Streptococcus gallolyticus subsp. pasteurianus (8.2%) were main bacterial pathogens. MIC testing of E. faecalis showed susceptibility to ampicillin, penicillin and vancomycin, but high-level resistance against gentamicin (48.1%). MLST revealed 12 Sequence Types (ST) of which ST 16 made up 44.5% and showed closely related PFGE types. Conclusion The different aetiology of UTI compared with reports elsewhere, where E. coli dominates, may be a result of chronic and recurrent UTIs together with indiscriminate use of antimicrobials. The similar genotypes shown by epidemiologically unrelated ST 16 isolates in Vietnam and elsewhere, suggest that E. faecalis ST 16 might represent a globally distributed clone. Treatment of UTI with cephalosporins may select for E. faecalis as it is intrinsic resistant and further studies are needed to establish the source(s) and role of E. faecalis ST 16 in acute UTI.
机译:背景技术泌尿道感染(UTI)是全世界女性中最常见的感染之一。大肠杆菌通常会导致超过75%的急性单纯性UTI,但是对于复发性UTI和滥用抗生素如何影响UTI的病因知之甚少。这项研究旨在确定从药房转诊到越南河内一家医院的复发性和自疗患者的泌尿道感染的病因,并描述相关细菌病原体的基因型和抗药性。通过表型和分子方法建立了与UTI有关的细菌病原体的病原学(定义为≥10 4 CFU / ml尿液)。通过多基因座序列分型(MLST),脉冲场凝胶电泳(PFGE)和抗菌药敏试验对粪肠球菌分离株进行分型。方法收集276例尿路感染症状患者的尿液样品,并在挠性琼脂上培养。可以检测最常见的尿液病原体。采访了患者有关潜在疾病,症状持续时间,UTI的早期发作,医生诊断的发作次数以及与UTI有关的治疗。通过PCR,16S rRNA和groEL基因的部分测序,将所有暂定的粪肠球菌和粪肠球菌分离株鉴定到物种水平。粪肠球菌的分离株还通过多基因座序列分型和抗菌药敏试验来表征。结果49名患者的平均年龄为48岁(范围为11-86岁),其中94%为女性。平均而言,据报告患者患有UTI达348天(范围为3天至10年,上一年经历了2.7次UTI)。据报道,头孢菌素是医院治疗尿路感染的第二种选择药物。粪肠球菌(55.1%),大肠杆菌(12.2%)和解链球菌亚种。巴氏杆菌属(8.2%)是主要的细菌病原体。粪肠球菌的MIC测试显示对氨苄青霉素,青霉素和万古霉素敏感,但对庆大霉素的高耐药性(48.1%)。 MLST揭示了12种序列类型(ST),其中ST 16占44.5%,并显示出密切相关的PFGE类型。结论与其他在大肠杆菌占主导地位的报道相比,UTI的病因不同,可能是慢性和复发性UTI以及滥用抗生素的结果。在越南和其他地方,流行病学无关的ST 16分离株显示出相似的基因型,表明粪肠球菌ST 16可能代表了全球分布的克隆。用头孢菌素治疗UTI可能会选择粪肠球菌,因为它具有内在的耐药性,需要进一步研究来确定粪肠球菌ST 16在急性UTI中的来源和作用。

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