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Specific detection of Muscovy duck parvovirus infection by TaqMan-based real-time PCR assay

机译:基于TaqMan的实时PCR检测特异性检测番鸭细小病毒感染

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Muscovy duck parvovirus (MDPV) causes high mortality and morbidity in Muscovy ducks, with the pathogenesis of the virus still unknown in many respects. Specific MDPV detection is often rife with false positive results because of high identity at the genomic nucleotide level and antigenic similarity with goose parvovirus (GPV). The objective of this study was to develop a sensitive, highly specific, and repeatable TaqMan-based real-time PCR (qPCR) assay for facilitating the molecular detection of MDPV. The specific primers and probe were designed based on the conserved regions within MDPVs, but there was a variation in GPVs of the nonstructural (NS) genes after genetic comparison. After the optimization of qPCR conditions, the detection limit of this qPCR assay was 29.7 copies/μl. The assay was highly specific for the detection of MDPV, and no cross-reactivity was observed with other non-targeted duck-derived pathogens. Intra- and inter-assay variability was less than 2.21%, means a high degree of repeatability. The diagnostic applicability of the qPCR assay was proven that MDPV-positive can be found in cloacal swabs samples, Muscovy duck embryos and newly hatched Muscovy ducklings. Our data provided incidents that MDPV could be possible vertically transmitted from breeder Muscovy ducks to Muscovy ducklings. The developed qPCR assay in the study could be a reliable and specific tool for epidemiological surveillance and pathogenesis studies of MDPV.
机译:番鸭细小病毒(MDPV)在番鸭中导致高死亡率和高发病率,在许多方面,该病毒的发病机理仍然未知。由于在基因组核苷酸水平上的高度同一性以及与鹅细小病毒(GPV)的抗原相似性,特异性MDPV检测经常会出现假阳性结果。这项研究的目的是开发一种基于TaqMan的灵敏,高度特异性和可重复性的实时PCR(qPCR)分析方法,以促进MDPV的分子检测。根据MDPV中的保守区域设计了特异性引物和探针,但是经过基因比较后,非结构(NS)基因的GPV存在差异。优化qPCR条件后,此qPCR测定的检出限为29.7拷贝/μl。该测定法对MDPV的检测具有高度特异性,并且未与其他非靶向鸭源病原体发生交叉反应。批内和批间变异度小于2.21%,意味着高度的可重复性。 qPCR测定法的诊断适用性已证明,在泄殖腔拭子样本,番鸭胚胎和刚孵出的番鸭中可以发现MDPV阳性。我们的数据提供了这样的事件,即MDPV可能会从种公番鸭垂直传播到番鸭。该研究中开发的qPCR检测方法可能是MDPV流行病学监测和发病机理研究的可靠且特定的工具。

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