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首页> 外文期刊>BMC Evolutionary Biology >Expansion and evolution of insect GMC oxidoreductases
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Expansion and evolution of insect GMC oxidoreductases

机译:昆虫GMC氧化还原酶的扩增和进化

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Background The GMC oxidoreductases comprise a large family of diverse FAD enzymes that share a homologous backbone. The relationship and origin of the GMC oxidoreductase genes, however, was unknown. Recent sequencing of entire genomes has allowed for the evolutionary analysis of the GMC oxidoreductase family. Results Although genes that encode enzyme families are rarely linked in higher eukaryotes, we discovered that the majority of the GMC oxidoreductase genes in the fruit fly (D. melanogaster), mosquito (A. gambiae), honeybee (A. mellifera), and flour beetle (T. castaneum) are located in a highly conserved cluster contained within a large intron of the flotillin-2 (Flo-2) gene. In contrast, the genomes of vertebrates and the nematode C. elegans contain few GMC genes and lack a GMC cluster, suggesting that the GMC cluster and the function of its resident genes are unique to insects or arthropods. We found that the development patterns of expression of the GMC cluster genes are highly complex. Among the GMC oxidoreductases located outside of the GMC gene cluster, the identities of two related enzymes, glucose dehydrogenase (GLD) and glucose oxidase (GOX), are known, and they play major roles in development and immunity. We have discovered that several additional GLD and GOX homologues exist in insects but are remotely similar to fungal GOX. Conclusion We speculate that the GMC oxidoreductase cluster has been conserved to coordinately regulate these genes for a common developmental or physiological function related to ecdysteroid metabolism. Furthermore, we propose that the GMC gene cluster may be the birthplace of the insect GMC oxidoreductase genes. Through tandem duplication and divergence within the cluster, new GMC genes evolved. Some of the GMC genes have been retained in the cluster for hundreds of millions of years while others might have transposed to other regions of the genome. Consistent with this hypothesis, our analysis indicates that insect GOX and GLD arose from a different ancestral GMC gene than that of fungal GOX.
机译:背景技术GMC氧化还原酶包含一个大家族的各种FAD酶,它们共享一个同源主链。然而,GMC氧化还原酶基因的关系和起源尚不清楚。整个基因组的最新测序已允许GMC氧化还原酶家族的进化分析。结果尽管编码酶家族的基因很少与高等真核生物联系在一起,但我们发现果蝇(D. melanogaster),蚊子(A. gambiae),蜜蜂(A. mellifera)和面粉中的大部分GMC氧化还原酶基因甲虫(T. castaneum)位于flotillin-2(Flo-2)基因大内含子中的高度保守簇中。相反,脊椎动物和线虫秀丽隐杆线虫的基因组几乎没有GMC基因,而缺少GMC簇,这表明GMC簇及其常驻基因的功能是昆虫或节肢动物所独有的。我们发现,GMC簇基因表达的发展模式是高度复杂的。在位于GMC基因簇外部的GMC氧化还原酶中,已知两种相关酶的身份,即葡萄糖脱氢酶(GLD)和葡萄糖氧化酶(GOX),它们在发育和免疫中起主要作用。我们发现昆虫中还存在其他几种GLD和GOX同源物,但与真菌GOX几乎相似。结论我们推测,GMC氧化还原酶簇已被保守地协调调控这些基因,以实现与蜕皮激素代谢相关的共同发育或生理功能。此外,我们建议GMC基因簇可能是昆虫GMC氧化还原酶基因的发源地。通过集群内的串联复制和分化,新的GMC基因得以进化。一些GMC基因已经在簇中保留了数亿年,而另一些则可能已经转移到基因组的其他区域。与此假设相符,我们的分析表明,昆虫GOX和GLD来自与真菌GOX不同的祖传GMC基因。

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