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Acceleration of dynamic fluorescence molecular tomography with principal component analysis

机译:动态荧光分子层析成像的主成分分析加速

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Dynamic fluorescence molecular tomography (FMT) is an attractive imaging technique for three-dimensionally resolving the metabolic process of fluorescent biomarkers in small animal. When combined with compartmental modeling, dynamic FMT can be used to obtain parametric images which can provide quantitative pharmacokinetic information for drug development and metabolic research. However, the computational burden of dynamic FMT is extremely huge due to its large data sets arising from the long measurement process and the densely sampling device. In this work, we propose to accelerate the reconstruction process of dynamic FMT based on principal component analysis (PCA). Taking advantage of the compression property of PCA, the dimension of the sub weight matrix used for solving the inverse problem is reduced by retaining only a few principal components which can retain most of the effective information of the sub weight matrix. Therefore, the reconstruction process of dynamic FMT can be accelerated by solving the smaller scale inverse problem. Numerical simulation and mouse experiment are performed to validate the performance of the proposed method. Results show that the proposed method can greatly accelerate the reconstruction of parametric images in dynamic FMT almost without degradation in image quality.
机译:动态荧光分子层析成像(FMT)是一种有吸引力的成像技术,用于三维解决小动物中荧光生物标记物的代谢过程。当与隔室模型结合使用时,动态FMT可用于获取参数化图像,从而可以为药物开发和代谢研究提供定量的药代动力学信息。但是,动态FMT的计算负担非常大,这是由于其冗长的测量过程和密集的采样设备而产生的大量数据集。在这项工作中,我们建议基于主成分分析(PCA)来加快动态FMT的重建过程。利用PCA的压缩特性,通过仅保留一些可以保留子权重矩阵的大部分有效信息的主分量,可以减小用于解决反问题的子权重矩阵的维数。因此,可以通过解决较小规模的逆问题来加快动态FMT的重建过程。数值模拟和鼠标实验进行了验证该方法的性能。结果表明,所提出的方法几乎可以在不降低图像质量的情况下极大地加速动态FMT中参数图像的重建。

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