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Microsatellite markers in tropical legume (Centrosema pubescens Benth): development, characterization, and cross-species amplification in Centrosema sp

机译:热带豆类中的微卫星标记(Centrosema pubescens Benth):Centrosema sp。的发育,特征和种间扩增

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摘要

Centrosema pubescens Benth is a forage legume widespread in tropical America. Twenty-six polymorphic microsatellite markers were isolated and characterized in 15 genotypes of C. pubescens from the Cerrados Research Center Germplasm Bank of the Brazilian Agricultural Research Corporation (Embrapa). The number of alleles observed for each locus ranged from 2 to 5, with an average of 3 alleles per locus. The polymorphism information content (PIC) varied between 0.39 and 0.86 (average 0.57) and the discriminating power (D) ranged from 0.45 to 0.98 (average 0.68). The observed heterozygosity (H o) and the expected heterozygosity (H e) were 0.01–0.81 and 0.10–0.86, respectively. A cross-amplification test in 11 Centrosema species suggested potential transferability of these microsatellites. The data indicated that the polymorphic microsatellite markers developed in this work should be useful for assessing genetic diversity in further breeding programs and germplasm conservation.
机译:毛竹(Centrosema pubescens Benth)是一种在热带美洲广泛分布的牧草。从巴西农业研究公司(Embrapa)的Cerrados研究中心种质库中分离出26种多态微卫星标记物,并以15个基因型的耻骨梭菌进行了表征。每个基因座观察到的等位基因数量为2至5,每个基因座平均3个等位基因。多态信息含量(PIC)在0.39和0.86之间(平均值0.57)变化,判别力(D)在0.45到0.98之间(平均值0.68)。观察到的杂合度(H o )和预期杂合度(H e )分别为0.01-0.81和0.10-0.86。在11种中心线虫物种中进行的交叉扩增试验表明,这些微卫星具有潜在的可转移性。数据表明,这项工作中开发的多态微卫星标记应有助于评估进一步的育种计划和种质保护中的遗传多样性。

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  • 来源
    《Conservation Genetics Resources》 |2009年第1期|347-352|共6页
  • 作者单位

    Centro de Biologia Molecular e Engenharia Genética Departamento de Genética e Evolução Universidade Estadual de Campinas Barão Geraldo CP 6010 Campinas SP CEP 13083-970 Brazil;

    Centro de Biologia Molecular e Engenharia Genética Departamento de Genética e Evolução Universidade Estadual de Campinas Barão Geraldo CP 6010 Campinas SP CEP 13083-970 Brazil;

    Centro de Biologia Molecular e Engenharia Genética Departamento de Genética e Evolução Universidade Estadual de Campinas Barão Geraldo CP 6010 Campinas SP CEP 13083-970 Brazil;

    Centro de Biologia Molecular e Engenharia Genética Departamento de Genética e Evolução Universidade Estadual de Campinas Barão Geraldo CP 6010 Campinas SP CEP 13083-970 Brazil;

    Centro de Biologia Molecular e Engenharia Genética Departamento de Genética e Evolução Universidade Estadual de Campinas Barão Geraldo CP 6010 Campinas SP CEP 13083-970 Brazil;

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  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类
  • 关键词

    Tropical legume; Cross-amplification; Molecular markers; Genetic diversity; Germplasm conservation;

    机译:热带豆科植物;交叉扩增;分子标记;遗传多样性;种质保护;

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