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Raman spectroscopic grading of astrocytoma tissues: using soft reference information

机译:星形细胞瘤组织的拉曼光谱分级:使用软参考信息

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Gliomas are the most frequent primary brain tumours. During neurosurgical treatment, locating the exact tumour border is often difficult. This study assesses grading of astrocytomas based on Raman spectroscopy for a future application in intra-surgical guidance. Our predictive classification models distinguish the surgically relevant classes “normal tissue” and “low” and “high grade astrocytoma” in Raman maps of moist bulk samples (80 patients) acquired with a fibre-optic probe. We introduce partial class memberships as a strategy to utilize borderline cases for classification. Borderline cases supply the most valuable training and test data for our application. They are (a) examples of the sought boundary and (b) the cases for which new diagnostics are needed. Besides, the number of suitable training samples increases considerably: soft logistic regression (LR) utilizes 85% more spectra and 50% more patients than linear discriminant analysis (LDA). The predictive soft LR models achieve ca. 85, 67 and 84% (normal, low and high grade) sensitivity and specificity. We discuss the different heuristics of LR and LDA in the light of borderline samples. While we focus on prediction, the spectroscopic interpretation of the predictive models agrees with previous descriptive studies. Unsaturated lipids are used to differentiate between normal and tumour tissues, while the total lipid content prominently contributes to the determination of the tumour grade. The high-wavenumber region above 2,800 cm−1 alone did not allow successful grading. We give a proof of concept for Raman spectroscopic grading of moist astrocytoma tissues and propose to include borderline samples into classifier training and testing.
机译:神经胶质瘤是最常见的原发性脑肿瘤。在神经外科治疗期间,通常很难找到确切的肿瘤边界。这项研究基于拉曼光谱评估星形细胞瘤的分级,以备将来在外科手术指导中应用。我们的预测分类模型在用光纤探头采集的潮湿散装样本(80例患者)的拉曼图中,将手术相关类别分为“正常组织”,“低级”和“高级星形细胞瘤”。我们引入部分类成员身份作为利用边界案例进行分类的策略。边界案例为我们的应用程序提供了最有价值的培训和测试数据。它们是(a)所寻求边界的示例,以及(b)需要新诊断程序的情况。此外,合适的训练样本数量大大增加:与线性判别分析(LDA)相比,软逻辑回归(LR)所使用的光谱多了85%,患者使用了50%以上。预测性的软LR模型可以达到约。 85、67和84%(正常,低和高等级)的敏感性和特异性。我们将根据边界样本讨论LR和LDA的不同启发式方法。当我们专注于预测时,预测模型的光谱解释与以前的描述性研究一致。不饱和脂质用于区分正常组织和肿瘤组织,而总脂质含量则显着有助于确定肿瘤等级。仅2,800 cm -1 之上的高波数区域无法成功进行渐变。我们给出了湿润星形细胞瘤组织拉曼光谱分级的概念证明,并建议将边界样本包括在分类器训练和测试中。

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