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Gene cloning of an important eukaryotic translation initiation factor family eIF2A gene in halophytic Leymus chinensis (Trin.)

机译:一个重要的真核翻译起始因子家族eIF2A基因的克隆在盐生植物羊草(Trin。)中

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摘要

Eukaryotic initiation factors eIF2A and eIF2 both play important roles in the mRNA translation of protein synthesis, whereas the functions of eIF2A are usually overlooked, as both functions of binding methyionly-tRNAi (Met-tRNAi) to 40S are similar under the same complementary factor and nucleotide requirements. Recently, the functions of eIF2A were reported to differ from those of eIF2 in manners when binding Met-tRNAi to 40S. Given that eukaryotic initiation factor eIF2 has been well known, eIF2A was still deficient in understanding of its sequence, structure and functions. In this work, we collected a high salt-tolerant grass Leymus chinensis (Trin.) as the object of study, and cloned and sequenced the eIF2A gene from this species. Based on the DNA alignment and analysis of eIF2A gene sequences from other organisms, an effective primer set was newly designed. Using this primer set, a DNA fragment with length of about 500 bp was obtained, and we have submitted this sequencing result to NCBI GenBank database (accession number: ). The Basic Local Alignment Search Tool (BLAST) result showed that our sequence is highly identical to eIF2A gene sequences that existed in NCBI GenBank database. This work would help to further understand the function of eIF2A, and provide more potential target genes for studying their functions in relation to stress tolerance mechanisms.
机译:真核生物起始因子eIF2A和eIF2在蛋白质合成的mRNA翻译中都起着重要作用,而eIF2A的功能通常被忽略,因为在相同的互补因子下结合Methionly-tRNAi(Met-tRNAi)与40S的两种功能相似,并且核苷酸要求。最近,据报道,当将Met-tRNAi结合至40S时,eIF2A的功能与eIF2的功能不同。考虑到真核起始因子eIF2是众所周知的,eIF2A仍然缺乏对其序列,结构和功能的了解。在这项工作中,我们收集了一个高耐盐草羊草(Trin。)作为研究对象,并从该物种克隆并测序了eIF2A基因。基于DNA序列比对和其他生物的eIF2A基因序列分析,新设计了有效的引物组。使用该引物组,获得了一个长度约为500 bp的DNA片段,并将此测序结果提交给NCBI GenBank数据库(登录号:)。基本局部比对搜索工具(BLAST)的结果表明,我们的序列与NCBI GenBank数据库中存在的eIF2A基因序列高度相同。这项工作将有助于进一步了解eIF2A的功能,并提供更多潜在的靶基因来研究其与压力耐受机制相关的功能。

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