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Extensions to the Visual Predictive Check to facilitate model performance evaluation

机译:扩展了Visual Predictive Check以促进模型性能评估

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摘要

The Visual Predictive Check (VPC) is a valuable and supportive instrument for evaluating model performance. However in its most commonly applied form, the method largely depends on a subjective comparison of the distribution of the simulated data with the observed data, without explicitly quantifying and relating the information in both. In recent adaptations to the VPC this drawback is taken into consideration by presenting the observed and predicted data as percentiles. In addition, in some of these adaptations the uncertainty in the predictions is represented visually. However, it is not assessed whether the expected random distribution of the observations around the predicted median trend is realised in relation to the number of observations. Moreover the influence of and the information residing in missing data at each time point is not taken into consideration. Therefore, in this investigation the VPC is extended with two methods to support a less subjective and thereby more adequate evaluation of model performance: (i) the Quantified Visual Predictive Check (QVPC) and (ii) the Bootstrap Visual Predictive Check (BVPC). The QVPC presents the distribution of the observations as a percentage, thus regardless the density of the data, above and below the predicted median at each time point, while also visualising the percentage of unavailable data. The BVPC weighs the predicted median against the 5th, 50th and 95th percentiles resulting from a bootstrap of the observed data median at each time point, while accounting for the number and the theoretical position of unavailable data. The proposed extensions to the VPC are illustrated by a pharmacokinetic simulation example and applied to a pharmacodynamic disease progression example.
机译:视觉预测检查(VPC)是评估模型性能的有价值的辅助工具。然而,以其最普遍应用的形式,该方法很大程度上取决于模拟数据与观察数据的分布的主观比较,而没有明确地量化和关联这两种信息。在最近对VPC的修改中,通过将观察到的和预测的数据显示为百分位来考虑了此缺点。另外,在其中一些适应中,视觉上表示预测中的不确定性。但是,尚未评估是否相对于观察数实现了围绕预测中位数趋势的观察的预期随机分布。此外,没有考虑每个时间点上丢失数据的影响和信息。因此,在此调查中,通过两种方法扩展了VPC,以支持对模型性能的较不主观的评估,从而支持更充分的评估:(i)定量视觉预测检查(QVPC)和(ii)引导视觉预测检查(BVPC)。 QVPC将观察值的分布表示为百分比,因此,无论数据密度在每个时间点高于或低于预测中位数,都可以将不可用数据的百分比可视化。 BVPC在每个时间点对观察到的数据中位数进行引导而权衡了预测中位数与第5,第50和第95个百分位数,同时考虑了不可用数据的数量和理论位置。 VPC的拟议扩展由药代动力学模拟实例说明,并应用于药效学疾病进展实例。

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