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Evolution through cold and deep waters: the molecular phylogeny of the Lithodidae (Crustacea: Decapoda)

机译:在寒冷和深水区域的进化:石Li科(甲壳纲:十足目)的分子系统发育

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摘要

The objectives of this work are to use gene sequence data to assess the hypothesis that the Lithodinae arose from ancestors with uncalcified abdomens in shallow waters of the North-East Pacific, investigate the monophyly and interrelationships of genera within the Lithodinae and to estimate the scale and minimum number of biogeographic transitions from the shallow environment to the deep sea and vice versa. To do this, phylogenetic analysis from three mitochondrial and three nuclear markers was conducted using minimum evolution, maximum likelihood and Bayesian methods. The Lithodinae as defined to include North Pacific genus Cryptolithodes may be paraphyletic, with the Hapalogastrinae and Cryptolithodes as sister taxa. This implies that the soft-bodied abdomen of the Hapalogastrinae might not be plesiomorphic for the Lithodidae. Paralomis, Lopholithodes, Phyllolithodes, Lithodes and Neolithodes share a common ancestor, from which the North Pacific Hapalogastrinae did not descend. Lithodid ancestors are likely to have had a north Pacific, shallow water distribution and to have had planktotrophic larvae. North Pacific genus Paralithodes is paraphyletic; P. brevipes is the most basal member of the genus (as sampled) while P. camtschaticus and P. platypus are more closely related to the genera Lithodes and Neolithodes. Genera Lithodes, Neolithodes and Paralomis (as sampled) are monophyletic if Glyptolithodes is included within Paralomis. Lopholithodes is closely related to, but not included within, the Paralomis genus. Paralomis is divided into at least two major lineages: one containing South Atlantic, West African, and Indian Ocean species, and the other containing Pacific and South American species. Several species of Paralomis do not resolve consistently with any other groups sampled, implying a complex and possibly rapid global evolution early in the history of the genus. Relationships within the Lithodes genus vary between analytical methods, suggesting that conclusions may not be stable. Consistently, however, Indian Ocean and Pacific forms—L. murrayi, L. longispina and L. nintokuae form a group separated from Atlantic species such as L. santolla, L. confundens, L. maja and L. ferox.Electronic supplementary materialThe online version of this article (10.1007/s00114-018-1544-2) contains supplementary material, which is available to authorized users.
机译:这项工作的目的是利用基因序列数据来评估假想藻起源于东北太平洋浅水区中未钙化的祖先的祖先的假说,调查假藻属内的属的单亲和相互关系,并估计其规模和从浅水环境到深海,反之亦然的最小生物地理过渡次数。为此,使用最小进化,最大似然和贝叶斯方法对三个线粒体和三个核标记进行了系统发育分析。定义为包括北太平洋隐孢子虫属的Lithodinae可能是共生的,Hapalogastrinae和隐孢子虫为姐妹类群。这暗示着Hapalogastrinae的腹部柔和,对于石tho科来说可能不是拟形的。抛物线虫,金缕石,毛状石,碎石和新石虫有一个共同的祖先,北太平洋Hapalogastrinae并没有从此降落。碎石祖先很可能具有北太平洋的浅水分布,并且有浮游性幼虫。北太平洋滑石纲属是类共生的。短小假单胞菌是该属中最基础的成员(如抽样),而camtschaticus和platypus则与Lithodes和Neolithodes属密切相关。如果在 Paralomis 中包含 Glyptolithode ,则Lithodes属,Neolithodes和Paralomis(已采样)是单系的。 Lopholithodes Paralomis 属密切相关,但未包含在其中。 Paralomis 至少分为两个主要谱系:一个包含南大西洋,西非和印度洋物种,另一个包含太平洋和南美物种。 Paralomis 的几种物种不能与其他任何采样组一致地解析,这暗示着该属历史的早期复杂而迅速的全球进化。分析方法中 Lithodes 属内的关系有所不同,这表明结论可能不稳定。但是,一致地,印度洋和太平洋形式- L。 murrayi L。 longispina L。 nintokuae 形成一个与大西洋物种(例如 L)分离的群体。 santolla L。 confundens L。 maja L。 ferox 。电子补充材料本文的在线版本(10.1007 / s00114-018-1544-2)包含补充材料,可供授权用户使用。

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