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Towards Predictive Computational Models of Oncolytic Virus Therapy: Basis for Experimental Validation and Model Selection

机译:建立溶瘤病毒治疗的预测计算模型:实验验证和模型选择的基础

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摘要

Oncolytic viruses are viruses that specifically infect cancer cells and kill them, while leaving healthy cells largely intact. Their ability to spread through the tumor makes them an attractive therapy approach. While promising results have been observed in clinical trials, solid success remains elusive since we lack understanding of the basic principles that govern the dynamical interactions between the virus and the cancer. In this respect, computational models can help experimental research at optimizing treatment regimes. Although preliminary mathematical work has been performed, this suffers from the fact that individual models are largely arbitrary and based on biologically uncertain assumptions. Here, we present a general framework to study the dynamics of oncolytic viruses that is independent of uncertain and arbitrary mathematical formulations. We find two categories of dynamics, depending on the assumptions about spatial constraints that govern that spread of the virus from cell to cell. If infected cells are mixed among uninfected cells, there exists a viral replication rate threshold beyond which tumor control is the only outcome. On the other hand, if infected cells are clustered together (e.g. in a solid tumor), then we observe more complicated dynamics in which the outcome of therapy might go either way, depending on the initial number of cells and viruses. We fit our models to previously published experimental data and discuss aspects of model validation, selection, and experimental design. This framework can be used as a basis for model selection and validation in the context of future, more detailed experimental studies. It can further serve as the basis for future, more complex models that take into account other clinically relevant factors such as immune responses.
机译:溶瘤病毒是特异性感染癌细胞并杀死它们,而使健康细胞保持完整的病毒。它们在肿瘤中扩散的能力使其成为一种有吸引力的治疗方法。尽管在临床试验中观察到了令人鼓舞的结果,但由于我们对控制病毒与癌症之间的动态相互作用的基本原理缺乏了解,因此仍然很难取得成功。在这方面,计算模型可以帮助优化治疗方案的实验研究。尽管已经进行了初步的数学工作,但这受到以下事实的困扰:各个模型在很大程度上是任意的,并且基于生物学上的不确定性假设。在这里,我们提出了一个通用的框架来研究溶瘤病毒的动力学,该动力学独立于不确定和任意的数学公式。根据关于控制病毒在细胞之间扩散的空间约束的假设,我们发现了两种动力学。如果感染的细胞混合在未感染的细胞中,则存在病毒复制速率阈值,超过该阈值,肿瘤控制是唯一的结果。另一方面,如果受感染的细胞聚集在一起(例如在实体瘤中),那么我们会观察到更复杂的动力学,根据细胞和病毒的初始数量,治疗的结果可能会以任何一种方式发生。我们将模型拟合到以前发布的实验数据,并讨论了模型验证,选择和实验设计的各个方面。该框架可以用作未来更详细的实验研究中模型选择和验证的基础。它可以进一步作为未来更复杂模型的基础,该模型考虑了其他临床相关因素(例如免疫反应)。

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