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Spinning Gland Transcriptomics from Two Main Clades of Spiders (Order: Araneae) - Insights on Their Molecular, Anatomical and Behavioral Evolution

机译:从两个主要蜘蛛进化分支中的腺体转录组学(顺序:Araneae)-关于它们的分子,解剖学和行为进化的见解

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摘要

Characterized by distinctive evolutionary adaptations, spiders provide a comprehensive system for evolutionary and developmental studies of anatomical organs, including silk and venom production. Here we performed cDNA sequencing using massively parallel sequencers (454 GS-FLX Titanium) to generate ∼80,000 reads from the spinning gland of Actinopus spp. (infraorder: Mygalomorphae) and Gasteracantha cancriformis (infraorder: Araneomorphae, Orbiculariae clade). Actinopus spp. retains primitive characteristics on web usage and presents a single undifferentiated spinning gland while the orbiculariae spiders have seven differentiated spinning glands and complex patterns of web usage. MIRA, Celera Assembler and CAP3 software were used to cluster NGS reads for each spider. CAP3 unigenes passed through a pipeline for automatic annotation, classification by biological function, and comparative transcriptomics. Genes related to spider silks were manually curated and analyzed. Although a single spidroin gene family was found in Actinopus spp., a vast repertoire of specialized spider silk proteins was encountered in orbiculariae. Astacin-like metalloproteases (meprin subfamily) were shown to be some of the most sampled unigenes and duplicated gene families in G. cancriformis since its evolutionary split from mygalomorphs. Our results confirm that the evolution of the molecular repertoire of silk proteins was accompanied by the (i) anatomical differentiation of spinning glands and (ii) behavioral complexification in the web usage. Finally, a phylogenetic tree was constructed to cluster most of the known spidroins in gene clades. This is the first large-scale, multi-organism transcriptome for spider spinning glands and a first step into a broad understanding of spider web systems biology and evolution.
机译:蜘蛛以独特的进化适应为特征,为解剖器官的进化和发育研究(包括丝绸和毒液的产生)提供了一个全面的系统。在这里,我们使用大型平行测序仪(454 GS-FLX Titanium)进行了cDNA测序,以从Actinopus spp的旋转腺中产生约80,000个读数。 (下称:Mygalomorphae)和Gasteracantha cancriformis(下称:Araneomorphae,Orbiculariae进化枝)。猕猴桃属保留了原始的网络使用特征,并呈现出一个未分化的旋转腺体,而轮状蜘蛛具有七个不同的旋转腺体和复杂的网络使用模式。使用MIRA,Celera Assembler和CAP3软件对每个蜘蛛的NGS读数进行聚类。 CAP3单基因通过管道进行自动注释,生物学功能分类和比较转录组学。与蜘蛛丝有关的基因是人工整理和分析的。尽管在Actinopus spp。中发现了一个单一的spidroin基因家族,但在轮虫中却遇到了大量专门的蜘蛛丝蛋白。由于它是从变形菌体进化而来的,因此显示出类似Astacin的金属蛋白酶(meprin亚家族)是Cancriformis中采样最多的单基因和重复的基因家族。我们的结果证实,丝蛋白分子库的进化伴随着(i)旋转腺体的解剖分化和(ii)网络使用中的行为复杂化。最后,构建了一个系统进化树,将大多数已知的蜘蛛丝蛋白聚集在基因进化枝中。这是蜘蛛旋转腺的首个大规模,多生物转录组,也是对蜘蛛网系统生物学和进化的广泛了解的第一步。

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