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Rapid Determination of Advanced Glycation End Products of Proteins Using MALDI-TOF-MS and PERL Script Peptide Searching Algorithm

机译:使用MALDI-TOF-MS和PERL脚本肽段搜索算法快速测定蛋白质的高级糖基化终产物

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摘要

Advanced glycation end products (AGEs), which are composed of various glucose or carbohydrate adducts, are thought to be responsible for several diabetic and age-related complications. However, to date, specific sites on proteins that are modified by AGEs remain largely unknown. We report here the use of matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF-MS) to determine the type and localization of several AGEs formed in vitro on human beta-2-microglobulin (β2M), and in vivo on type 2 ryanodine receptor calcium-release channel (RyR2), and sarco(endo)plasmic reticulum (SERCA2a). A PERL script algorithm, developed in-house, makes searching the relatively large amount of data generated by the MALDI-MS more manageable. The outstanding sensitivity of MALDI-TOF-MS coupled with the PERL script algorithm allows such an approach to be a very useful tool in detecting AGEs and other post-translational modifications. We believe that this method could be an important tool when searching for post-translational modifications on proteins.
机译:由各种葡萄糖或碳水化合物加合物组成的高级糖基化终末产物(AGEs)被认为与多种糖尿病和与年龄有关的并发症有关。然而,迄今为止,在很大程度上,AGEs修饰的蛋白质上的特定位点仍然未知。我们在这里报告了基质辅助激光解吸/电离飞行时间质谱(MALDI-TOF-MS)的使用,以确定体外在人β-2-微球蛋白(β2M)上形成的几种AGE的类型和定位,并通过2型ryanodine受体钙释放通道(RyR2)和肌(内)质网(SERCA2a)体内。内部开发的PERL脚本算法使对MALDI-MS生成的相对大量数据的搜索更易于管理。 MALDI-TOF-MS的出色灵敏度与PERL脚本算法相结合,使得这种方法成为检测AGE和其他翻译后修饰的非常有用的工具。我们认为,这种方法可能是搜索蛋白质翻译后修饰时的重要工具。

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