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Time Dependency of Chemodiversity and Biosynthetic Pathways: An LC-MS Metabolomic Study of Marine-Sourced Penicillium

机译:化学多样性和生物合成途径的时间依赖性:海洋来源青霉的LC-MS代谢组学研究

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摘要

This work aimed at studying metabolome variations of marine fungal strains along their growth to highlight the importance of the parameter “time” for new natural products discovery. An untargeted time-scale metabolomic study has been performed on two different marine-derived Penicillium strains. They were cultivated for 18 days and their crude extracts were analyzed by HPLC-DAD-HRMS (High Performance Liquid Chromatography-Diode Array Detector-High Resolution Mass Spectrometry) each day. With the example of griseofulvin biosynthesis, a pathway shared by both strains, this work provides a new approach to study biosynthetic pathway regulations, which could be applied to other metabolites and more particularly new ones. Moreover, the results of this study emphasize the interest of such an approach for the discovery of new chemical entities. In particular, at every harvesting time, previously undetected features were observed in the LC-MS (Liquid Chromatography-Mass Spectrometry) data. Therefore, harvesting times for metabolite extraction should be performed at different time points to access the hidden metabolome.
机译:这项工作旨在研究海洋真菌菌株生长过程中代谢组的变异,以突出“时间”参数对于新天然产物发现的重要性。对两种不同的海洋来源的青霉菌株进行了无目标的时标代谢组学研究。将它们培养18天,并每天通过HPLC-DAD-HRMS(高效液相色谱-二极管阵列检测器-高分辨率质谱法)分析其粗提取物。以灰黄霉素的生物合成为例,两种菌株共有这种途径,这项工作为研究生物合成途径的调控提供了一种新方法,该方法可应用于其他代谢产物,尤其是新的代谢产物。此外,这项研究的结果强调了这种方法对发现新化学实体的兴趣。特别地,在每个收获时间,在LC-MS(液相色谱-质谱)数据中观察到先前未检测到的特征。因此,应在不同时间点进行代谢物提取的收获时间,以获取隐藏的代谢组。

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