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Resolution enhancement and realistic speckle recovery with generative adversarial modeling of micro-optical coherence tomography

机译:具有微光相干断层扫描的生成对抗结构的分辨率提高和现实斑点恢复

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摘要

A resolution enhancement technique for optical coherence tomography (OCT), based on Generative Adversarial Networks (GANs), was developed and investigated. GANs have been previously used for resolution enhancement of photography and optical microscopy images. We have adapted and improved this technique for OCT image generation. Conditional GANs (cGANs) were trained on a novel set of ultrahigh resolution spectral domain OCT volumes, termed micro-OCT, as the high-resolution ground truth (∼1 μm isotropic resolution). The ground truth was paired with a low-resolution image obtained by synthetically degrading resolution 4x in one of (1-D) or both axial and lateral axes (2-D). Cross-sectional image (B-scan) volumes obtained from in vivo imaging of human labial (lip) tissue and mouse skin were used in separate feasibility experiments. Accuracy of resolution enhancement compared to ground truth was quantified with human perceptual accuracy tests performed by an OCT expert. The GAN loss in the optimization objective, noise injection in both the generator and discriminator models, and multi-scale discrimination were found to be important for achieving realistic speckle appearance in the generated OCT images. The utility of high-resolution speckle recovery was illustrated by an example of micro-OCT imaging of blood vessels in lip tissue. Qualitative examples applying the models to image data from outside of the training data distribution, namely human retina and mouse bladder, were also demonstrated, suggesting potential for cross-domain transferability. This preliminary study suggests that deep learning generative models trained on OCT images from high-performance prototype systems may have potential in enhancing lower resolution data from mainstream/commercial systems, thereby bringing cutting-edge technology to the masses at low cost.
机译:基于生成的对抗网络(GANS)的光学相干断层扫描(OCT)的分辨率增强技术进行了开发和调查。 GAN已经用于分辨摄影和光学显微镜图像的分辨率。我们改进并改进了OCT图像生成的这种技术。有条件的GANS(CGANS)培训在一组新颖的超高分辨率谱系OCT卷,称为Micro-OCT,作为高分辨率的地面真理(~1μm各向同性分辨率)。地面真理与通过合成(1-D)或轴向和横向轴(2-D)中的合成分辨率4x获得的低分辨率图像配对。在单独的可行性实验中使用从人唇(唇部)组织和小鼠皮肤的体内成像中获得的横截面图像(B扫描)体积。通过由OCT专家执行的人类感知精度测试量化了分辨率增强的准确性。在优化目标中的GaN损失,发电机和鉴别器模型中的噪声注射以及多种判别对于在所生成的OCT图像中实现现实散斑外观很重要。通过唇部组织中的血管微OCT成像的实例说明了高分辨率斑点恢复的效用。还证明了将模型应用于来自培训数据分布的图像数据,即人视网膜和小鼠膀胱的定性示例,表明跨域可转移性的潜力。该初步研究表明,来自高性能原型系统的OCT图像上培训的深度学习生成模型可能具有增强来自主流/商业系统的较低分辨率数据,从而以低成本将尖端技术带到肿块中。

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