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Single-center versus multi-center data sets for molecular prognostic modeling: a simulation study

机译:用于分子预测模型的单中心与多中心数据集:模拟研究

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摘要

Oncological treatment is based on surgery, radiotherapy, chemotherapy and immunotherapy for reduction of tumor burden and for improvement of local control of the tumor. Of particular importance is radiotherapy, which has been shown in numerous studies to improve local control and overall survival of patients [ , ]. Radiation oncology treatment strives to optimize the reduction of tumor cells while preserving the surrounding non-tumor tissue. Effectiveness is influenced by a number of factors such as radiation sensitivity, the anatomical borders and immunogenic constitution of the tumor, and its environment [ ]. The interplay between these factors is complex and prediction of the radiation response and overall clinical performance requires detailed measurement of the underlying molecular state of the tissue. This is increasingly attempted through the use of systemic multi-level omics biology approaches [ , ]. The complexity of the interplay is consistently reflected in the heterogeneous risks of subgroups of cancer patients in terms of local and distant control and overall survival, e.g. in head and neck cancer or glioblastoma [ , ]. This heterogeneity is a great challenge in oncology since it means that only a subgroup of treated patients is likely to benefit from standard therapy. Hence, the need for prognostic factors predicting individual response is great and a lot of research effort has been invested in the past decade to identify molecular prognostic markers from multi-level omics data generated from clinical patient samples. Examples that have reached clinical practice are the diagnostic assays OncotypeDX and Mammaprint, which predict the risk of recurrence or metastasis in breast cancer [ , ]. For locally advanced head and neck cancer and glioblastoma, prognostic gene and miRNA signatures predicting local and distant control or overall survival have been recently identified and are promising markers with the potential to allow substratification of standard-therapy treated patients for alternative treatment strategies [ – ].
机译:肿瘤学治疗以手术,放疗,化学疗法和免疫疗法为基础,以减轻肿瘤负担并改善对肿瘤的局部控制。放疗特别重要,已在许多研究中证明了放疗可以改善患者的局部控制和总体生存率[,]。放射肿瘤学治疗致力于优化肿瘤细胞的减少,同时保留周围的非肿瘤组织。有效性受许多因素影响,例如放射敏感性,肿瘤的解剖边界和免疫原性构成及其环境[]。这些因素之间的相互作用是复杂的,对放射反应和整体临床表现的预测需要对组织的潜在分子状态进行详细测量。通过使用系统的多级组学生物学方法,越来越多地尝试这种方法。相互作用的复杂性始终反映在癌症患者亚组在局部和远距离控制以及整体生存方面的异质风险,例如在头颈癌或成胶质细胞瘤中[]。这种异质性在肿瘤学上是一个巨大的挑战,因为这意味着只有一小部分接受治疗的患者可能会受益于标准疗法。因此,对预测个体反应的预后因素的需求很大,并且在过去的十年中投入了大量的研究工作,以从临床患者样品产生的多级组学数据中鉴定分子预后标记。诊断实践OncotypeDX和Mammaprint已达到临床实践的例子,它们可以预测乳腺癌复发或转移的风险[,]。对于局部晚期头颈癌和胶质母细胞瘤,最近已鉴定出预测局部和远距离控制或总体存活的预后基因和miRNA信号,这些标志物有望使标准疗法治疗的患者成为替代治疗策略的基础[–] 。

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