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Phenotypic and Genotypic Characterization of Canadian Clinical Isolates of Vibrio parahaemolyticus Collected from 2000 to 2009

机译:2000年至2009年收集的加拿大副溶血性弧菌临床分离株的表型和基因型特征

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摘要

Vibrio parahaemolyticus is the leading bacterial cause of food-borne illness due to the consumption of contaminated seafood. The aim of the present study was to determine the population of its subtypes and establish a better understanding of the various types of V. parahaemolyticus strains that are causing human illness in Canada. The subtypes for 100 human clinical isolates of V. parahaemolyticus collected between 2000 and 2009 were determined by performing serotyping, ribotyping, pulsed-field gel electrophoresis, and multilocus sequence typing. Within this panel of strains, there was a high level of diversity (between 22 and 53 subtypes per method), but the presence of predominant clones with congruent subtypes between the various methods was also observed. For example, all 32 isolates belonging to sequence type 36 (ST36) were from serogroup O4, while 31 of them were ribotype EcoVib235-287, and 24 of the 32 were SfiI pulsed-field gel electrophoresis (PFGE) pattern VPSF1.0001. With regard to the presence of known virulence genes, 74 of the 100 isolates were PCR positive for the presence of the thermostable direct hemolysin (tdh); and 59 of these 74 strains also contained the second virulence marker, the tdh-related hemolysin (trh). The detection of trh was more predominant (81%) among the clinical isolates, and only four (4%) of the clinical isolates tested negative for the presence of both tdh and trh. This database, comprising 100 clinical isolates of V. parahaemolyticus strains from Canada, forms a baseline understanding of subtype diversity for future source attribution and other epidemiologic studies.
机译:由于食用受污染的海鲜,副溶血性弧菌是食源性疾病的主要细菌病因。本研究的目的是确定其亚型的种群,并更好地了解引起加拿大人类疾病的副溶血性弧菌菌株的各种类型。通过进行血清分型,核糖分型,脉冲场凝胶电泳和多基因座序列分型,确定了2000年至2009年之间收集的100株人类副溶血性弧菌临床分离株的亚型。在这组菌株中,存在高度的多样性(每种方法在22至53个亚型之间),但是在各种方法之间也观察到了主要的克隆,它们具有一致的亚型。例如,属于序列类型36(ST36)的所有32个分离物均来自O4血清型,其中31个是核糖型EcoVib235-287,而32个中的24个是SfiI脉冲场凝胶电泳(PFGE)模式VPSF1.0001。关于已知的毒力基因的存在,在100个分离株中,有74个对热稳定的直接溶血素(tdh)存在PCR阳性。在这74个菌株中,有59个还含有第二个毒力标记,即tdh相关的溶血素(trh)。在临床分离株中,trh的检测更为主要(81%),并且只有四个(4%)临床分离株检测到tdh和trh均呈阴性。该数据库包括来自加拿大的100株副溶血性弧菌菌株的临床分离株,形成了对亚型多样性的基础了解,以用于将来的来源归因和其他流行病学研究。

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