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Parallelized volumetric fluorescence microscopy with a reconfigurable coded incoherent light-sheet array

机译:具有可重配置编码非相干光片阵列的平行体积荧光显微镜

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摘要

General schematic of the CLAM setup. The setup mainly consists of four key parts: (1) an angle-misaligned mirror pair (or “infinity mirror”) for the generation of the beamlet array; (2) a light-sheet encoder for the light modulation of the beamlet array with the temporal codes; (3) relay optics for shaping the beamlet array to the light-sheet array; and (4) imaging optics in which the detection arm and illumination arm are orthogonal to each other. Virtual source generation ( ) by the “infinity mirror”. Using ray tracing, the kth beamlet decomposed from the incident light cone follows a total of 2 reflections between the angle-misaligned mirror pair and is retroreflected back to the entrance (the solid line is the forward path, and the dotted line is the backward path). Furthermore, there is a light path, called the , along which the forward and backward paths are overlapped (red rays). There are other sets of light paths within the th beamlet satisfying the condition of 2 reflections. However, these beamlets follow slightly different trajectories after the entrance (blue rays) such that their forward and backward paths are not overlapped. These light rays return to the entrance but with a minute lateral shift from the cardinal ray. In effect, the th beamlet can be considered as a “light fan” diverging from a source with a very low numerical aperture (≪0.1) located at . Parallelized light-sheet array illumination. As each light sheet is temporally modulated with a unique code generated by the light-sheet encoder, the fluorescence signals from different depths along the z-direction, tagged with the same temporal codes, are multiplexed and detected by the camera. Workflow of the image reconstruction of CLAM (for a volumetric image of a branching blood vessel).
机译:CLAM设置的一般示意图。该设置主要包括四个关键部分:(1)用于生成子束阵列的角度未对准的反射镜对(或“无穷大反射镜”); (2)光片编码器,用于利用时间码对小射束阵列进行光调制; (3)用于将子束阵列整形为光片阵列的中继光学器件; (4)成像光学器件,其中检测臂和照明臂彼此正交。通过“无限镜”生成虚拟源()。使用光线跟踪,从入射光锥分解的第k个子束在未对准角度的反射镜对之间总共进行2次反射,并向后反射回入口(实线是前进路径,而虚线是后退路径)。此外,还有一条称为的光路,沿着该光路,向前和向后的路径会重叠(红色光线)。在第一个子束中还有满足2个反射条件的其他光路集。但是,这些子束在进入(蓝色光线)之后遵循略有不同的轨迹,因此它们的前进和后退路径不会重叠。这些光线返回到入口,但与主光线有微小的横向偏移。实际上,th子束可以看作是“光扇”,它偏离位于处具有非常低数值孔径(≪0.1)的光源。平行光片阵列照明。当利用由光片编码器生成的唯一码在时间上调制每个光片时,来自z方向不同深度的,用相同的时间码标记的荧光信号被摄像机复用并检测到。 CLAM图像重建的工作流程(用于分支血管的体积图像)。

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