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Identification of CBF Transcription Factors in Tea Plants and a Survey of Potential CBF Target Genes under Low Temperature

机译:低温下茶树CBF转录因子的鉴定及潜在CBF靶基因的研究

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摘要

C-repeat binding factors (CBFs) are key signaling genes that can be rapidly induced by cold and bind to the C-repeat/dehydration-responsive motif (CRT/DRE) in the promoter region of the downstream cold-responsive (COR) genes, which play a vital role in the plant response to low temperature. However, the CBF family in tea plants has not yet been elucidated, and the possible target genes regulated by this family under low temperature are still unclear. In this study, we identified five family genes in the tea plant genome and analyzed their phylogenetic tree, conserved domains and motifs, and cis-elements. These results indicate that may be unique in the family. This is further supported by our findings from the low-temperature treatment: all the genes except were significantly induced after treatment at 4 °C. The expression profiles of eight tea plant tissues showed that were mainly expressed in winter mature leaves, roots and fruits. Furthermore, 685 potential target genes were identified by transcriptome data and CRT/DRE element information. These target genes play a functional role under the low temperatures of winter through multiple pathways, including carbohydrate metabolism, lipid metabolism, cell wall modification, circadian rhythm, calcium signaling, transcriptional cascade, and hormone signaling pathways. Our findings will further the understanding of the stress regulatory network of in tea plants.
机译:C-重复结合因子(CBF)是关键信号基因,可以被冷迅速诱导并与下游冷-响应(COR)基因启动子区域的C-重复/脱水响应基序(CRT / DRE)结合,在植物对低温的反应中起着至关重要的作用。然而,尚未阐明茶树中的CBF家族,并且尚不清楚该家族在低温下调控的靶基因。在这项研究中,我们确定了茶树基因组中的五个家族基因,并分析了它们的系统树,保守的结构域和基序以及顺式元件。这些结果表明,在家庭中可能是独特的。我们在低温处理中的发现进一步支持了这一点:在4°C处理后,所有基因均被显着诱导。八种茶树组织的表达谱显示主要在冬季成熟的叶子,根和果实中表达。此外,通过转录组数据和CRT / DRE元素信息鉴定了685个潜在的靶基因。这些靶基因在冬季的低温下通过多种途径发挥功能性作用,包括碳水化合物代谢,脂质代谢,细胞壁修饰,昼夜节律,钙信号传导,转录级联和激素信号传导途径。我们的发现将进一步了解茶树的压力调节网络。

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