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Hybrid Finite Element Method for Describing the Electrical Response of Biological Cells to Applied Fields

机译:描述生物细胞对应用场的电响应的混合有限元方法

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摘要

A novel hybrid finite element method for modeling the response of passive and active biological membranes to external stimuli is presented. The method is based on the differential equations that describe the conservation of electric flux and membrane currents. By introducing the electric flux through the cell membrane as an additional variable, the algorithm decouples the linear partial differential equation part from the nonlinear ordinary differential equation part that defines the membrane dynamics of interest. This conveniently results in two subproblems: a linear interface problem and a nonlinear initial value problem. The linear interface problem is solved with a hybrid finite element method. The initial value problem is integrated by a standard ordinary differential equation solver such as the Euler and Runge-Kutta methods. During time integration, these two subproblems are solved alternatively. The algorithm can be used to model the interaction of stimuli with multiple cells of almost arbitrary geometries and complex ion-channel gating at the plasma membrane. Numerical experiments are presented demonstrating the uses of the method for modeling field stimulation and action potential propagation.
机译:提出了一种新颖的混合有限元方法,用于建模被动和主动生物膜对外部刺激的响应。该方法基于描述电通量和膜电流守恒的微分方程。通过引入通过细胞膜的电通量作为附加变量,该算法将线性偏微分方程部分与定义目标膜动力学的非线性常微分方程部分解耦。这很方便地导致两个子问题:线性接口问题和非线性初始值问题。线性界面问题用混合有限元法解决。初始值问题通过标准的常微分方程求解器(例如Euler和Runge-Kutta方法)进行积分。在时间积分期间,这两个子问题可以交替解决。该算法可用于模拟刺激与几乎任意几何形状的多个细胞以及质膜上复杂的离子通道门控的相互作用。进行了数值实验,证明了该方法用于模拟场刺激和动作电位传播的用途。

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  • 期刊名称 other
  • 作者单位
  • 年(卷),期 -1(54),4
  • 年度 -1
  • 页码 611
  • 总页数 24
  • 原文格式 PDF
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