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The role of dynamic stimulation pattern in the analysis of bistable intracellular networks

机译:动态刺激模式在双稳态细胞内网络分析中的作用

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摘要

Bistable systems play an important role in the functioning of living cells. Depending on the strength of the necessary positive feedback one can distinguish between (irreversible) “one-way switch” or (reversible) “toggle-switch” type behavior. Besides the well established steady state properties, some important characteristics of bistable systems arise from an analysis of their dynamics. We demonstrate that a supercritical stimulus amplitude is not sufficient to move the system from the lower (off-state) to the higher branch (on-state) for either a step or a pulse input. A switching surface is identified for the system as a function of the initial condition, input pulse amplitude and duration (a supercritical signal). We introduce the concept of bounded autonomy for single level systems with a pulse input. Towards this end, we investigate and characterize the role of the duration of the stimulus. Furthermore we show, that a minimal signal power is also necessary to change the steady state of the bistable system. This limiting signal power is independent of the applied stimulus and is determined only by systems parameters. These results are relevant for the design of experiments, where it is often difficult to create a defined pattern for the stimulus. Furthermore, intracellular processes, like receptor internalization, do manipulate the level of stimulus such that level and duration of the stimulus is conducive to characteristic behavior.
机译:双稳态系统在活细胞的功能中起重要作用。根据必要的正反馈的强度,可以区分(不可逆)“单向开关”或(可逆)“拨动开关”类型行为。除了建立良好的稳态特性外,双稳态系统的一些重要特征还来自其动力学分析。我们证明,对于步长或脉冲输入,超临界激励幅度不足以将系统从较低(关闭状态)移动到较高分支(接通状态)。根据初始条件,输入脉冲幅度和持续时间(超临界信号)确定系统的开关表面。我们介绍了带脉冲输入的单级系统的有界自治概念。为此,我们调查并描述了刺激持续时间的作用。此外,我们表明,最小信号功率对于改变双稳态系统的稳态也是必需的。该限制信号功率与所施加的激励无关,并且仅由系统参数确定。这些结果与实验设计有关,在实验设计中,通常很难为刺激创建定义的模式。此外,像受体内在化一样,细胞内过程确实操纵了刺激的水平,从而刺激的水平和持续时间有利于特征行为。

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