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Genetic variants influencing human aging from late-onset Alzheimer’s disease (LOAD) genome-wide association studies (GWAS)

机译:遗传变异影响人类老龄化从晚期疾病(载荷)基因组 - 宽协会研究(GWAS)

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摘要

Genetics plays a crucial role in human aging with up to 30% of those living to the mid-80s being determined by genetic variation. Survival to older ages likely entails an even greater genetic contribution. There is increasing evidence that genes implicated in age-related diseases, such as cancer and neuronal disease, play a role in affecting human life span. We have selected the 10 most promising late-onset Alzheimer’s disease (LOAD) susceptibility genes identified through several recent large genome-wide association studies (GWAS). These 10 LOAD genes (APOE, CLU, PICALM, CR1, BIN1, ABCA7, MS4A6A, CD33, CD2AP, and EPHA1) have been tested for association with human aging in our dataset (1385 samples with documented age at death [AAD], age range: 58–108 years; mean age at death: 80.2) using the most significant single nucleotide polymorphisms (SNPs) found in the previous studies. Apart from the APOE locus (rs2075650) which showed compelling evidence of association with risk on human life span (p = 5.27 × 10−4), none of the other LOAD gene loci demonstrated significant evidence of association. In addition to examining the known LOAD genes, we carried out analyses using age at death as a quantitative trait. No genome-wide significant SNPs were discovered. Increasing sample size and statistical power will be imperative to detect genuine aging-associated variants in the future. In this report, we also discuss issues relating to the analysis of genome-wide association studies data from different centers and the bioinformatic approach required to distinguish spurious genome-wide significant signals from real SNP associations.
机译:遗传学在人类衰老中发挥着至关重要的作用,高达30%的生活于80年代的遗传变异决定。生存到年龄较大的年龄可能导致更大的遗传贡献。越来越多的证据表明基因涉及与癌症和神经元疾病等年龄相关的疾病,在影响人类寿命方面发挥作用。我们选择了通过几种最近的大型基因组 - 范围协会研究(GWAS)鉴定的10个最有前途的晚期阿尔茨海默病(载荷)易感性基因。已经测试了这些10载基因(ApoE,Clu,麦克麻,Cr1,Bin1,ABCA7,MS4A6A,CD33,CD2AP和EphA1)与我们的数据集中的人类衰老相关(1385个样本,在死亡中的记录年龄[AAD],年龄范围:58-108岁;死亡的平均年龄:80.2)使用先前研究中发现的最重要的单一核苷酸多态性(SNP)。除了Apoe Locus(RS2075650)外,表现出与人类寿命风险相关的令人信服的证据(p = 5.27×10 -4 -4 sup>),其他负载基因基因座都没有表现出显着的关联证据。除了检查已知的载荷基因外,我们还使用死亡年龄作为定量特征进行分析。没有发现基因组显着的SNP。增加样品大小和统计功率将是未来检测真正老化相关的变体。在本报告中,我们还讨论了与不同中心的基因组关联研究数据分析有关的问题,以及区分虚假基因组的重要信号从真正的SNP关联所需的生物信息方法。

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